Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3007g00001 ATGAAGCACAAGCTCGAACAAGACTTAATTGAAGACCAAACATATCCCAAGATGCAGCACCTTGCTTCCCAACAACCTCACCCAAAATTTTCTGCTAAGATTCTACAACAAGTTTCTCTCCTCAATTCTGCACTCTCACTCTCCGCTTCAGATTGCTCTGCTGTTAATAGCGCTGTCCATGTCCTTTTTGAACTCGCCAAAAATGAGGACCTTGTGGTAGTGGATACTATAGTGAACTGCGGCGCTGTCCCTGCTCTGGTAAGGCATCTTCAAGCACCAGACACCATGAAAGATGATGGTGATGACGTTATCAAACCTTACCAACATGAGGTGAAGGAAGGATGTGCGTTCGTCCTTGGGCTTCTTGCCATTCAAGTTGCATATTCCAAACAAGGTATCTTTATCCTCCAAAGGAAGTATGTACTCGATCTCCTCAAAGAAACAAGAAAATTGAGATGCAAGACCTTAGGGGTACCTATTGACAAGAATCATAGGATTGAGTGTGAAGAAAGTCCAACCATAGAGAAGTTTCAATATCAGAGATTGGTGGGGAAATTGATCTATTTATCACACACTAAGTCAGATATTGTCTATGCTGTTAGTGTGGCAAGTTTAGGAAAAGGACTGCTGTTCAAAAAAGAAGTTACATTGTCCATGAAAATATATACAGATGGAAACTATGCAGGATCAGTTGTAGATAGAAGATCCACTTCTGTATATTGTATGTTTCTGGGAGGAAATCTACGAGAGTATCAAAAAATCATCATAGATGCTGGAGCCTTGCCCTGTCTTGTAGATTTGTTAAGGAGGCACAAGATCAGTACCATTTCTCAACCATATATTGATCTTCTAAGGAGAGTAGCTGGTGCAATAAGTAGCCTTGCCTATGAAAATTCTGACATTAAGATCCTTGTTAGGACGGAAGGTGGTATACCTCCTCTTGTTGAATTGCTTGAATTCAATGACATAAAGGTACAGAGAGAAGCTGCACGGGCCTTGCGAACTCTTGCATTTCAAAATGATCACAATAAAAATCAGATTGTTGAATGCAATGCATTACCCACTCTTGTACTAATGCTTCGATCAAAGGATCCTAAAATACATTACGAGGCGGTTGGTCTGATTGGAGTTATGGTCCACTCTTCACCAAATATTAAGAAAGATGTTCTTCTAGCTGGGGCTTTACAACCTGTTATTTGTTTACTTAGTTCCTGCTGTTCGGAGAGCCGAAGAGAAGCAGCCCTTTTACTTGGTCAGTTTGCTGCAACACATTCAGATTGCAAGGTTCATATTGCCCAAAGAGGAGCTATTCCACCATTAGTTGACATGCTTAAGTCTCCGGATCCAAGGCTTCAGGAAATGTCAGCTTTTGCACTTGGGAGGTTGGCACAGGACTCACACAATCAAGCTGGTATTGTTTGTAACGGAGGTATAGAGCCTCTGCTCAATCTTCTTATCTCAAATAATGTGCCCCTCCAACATAGTGCTGCTTTTGTTCTCTATTATCTTGCTTATAATGAGGACAATGTTGTAGACATTATTAAGGCTGGTGGTTTTCAAAGATTGAAGGCTGGATCTTTCGAAAATGAAGCTACTAGAGTGTGTGTAGCAAATACGTTAAAAAGATTAGAGATGAAGGTGATAGGGGCAGCGAGGTTTCTTGGAAATCCTATGCAGGTGTTGAACCACCTAATATATCTTATGCGCTCTGAGGAAGAAGTGGTTCAAAGACGTATAGCTATTGCTCTTGCTTATTTATGTTCTCCTAATGATCGTAAAACTATATTCATTAACAATAATGGATTAGAATTGCTGCTGGGTCTTCTTGAGTCTCCAGACATAAAGCAGAAGGGCGATGCTTCAGCGGCACTTCACCATTTGGCTGCCAAAATCAGTTCTTCTTTCTGTCTTTTTGAAGCTGCTCCTCCATCACCAACTCCCCTGATGTACTTGGACGAGGAATATGTAAACAATTCTAAACATTCTGATGTCACATTCGTGGTTGAAGGTAGAAATTTTTATGCTCATAGAAATTGTTTACTTTCTTCAGATATATTTCGTGCAATGTTTGATGGCAGTTATAGGGAAAGGGAAGCCAAACATATAGTGATTACAGATATTAAATGGGATGTCTTTGAATTGATGATGAGATATATATATACTGGATCAGTAGATGTCAATTTGGATATTGCTCATGACCTCCTCAGAGCTGCAGATCAGTACCTTCTGGATGGCCTTAAGCGAATTTGTGAAAACGCTATTGTTCAGGATATTTCTGTGGAAAATGTTTCACTAATGTACAAGATGTCGGAGGATTTCAATGCTACTACATTAAAACATGCATGCATACTGTTTATGCTGGAGAAATTTGATAATCTGAACTCCAAACCATGGTATTGTCCCCTGATTGGTCGCATTGTCCCAGACATACGAATGTTCTTCTCAACTAAACTTGTCAAAAAGTCTCGTTCAGCTGCCTGGTGA 2484 0.4022 MKHKLEQDLIEDQTYPKMQHLASQQPHPKFSAKILQQVSLLNSALSLSASDCSAVNSAVHVLFELAKNEDLVVVDTIVNCGAVPALVRHLQAPDTMKDDGDDVIKPYQHEVKEGCAFVLGLLAIQVAYSKQGIFILQRKYVLDLLKETRKLRCKTLGVPIDKNHRIECEESPTIEKFQYQRLVGKLIYLSHTKSDIVYAVSVASLGKGLLFKKEVTLSMKIYTDGNYAGSVVDRRSTSVYCMFLGGNLREYQKIIIDAGALPCLVDLLRRHKISTISQPYIDLLRRVAGAISSLAYENSDIKILVRTEGGIPPLVELLEFNDIKVQREAARALRTLAFQNDHNKNQIVECNALPTLVLMLRSKDPKIHYEAVGLIGVMVHSSPNIKKDVLLAGALQPVICLLSSCCSESRREAALLLGQFAATHSDCKVHIAQRGAIPPLVDMLKSPDPRLQEMSAFALGRLAQDSHNQAGIVCNGGIEPLLNLLISNNVPLQHSAAFVLYYLAYNEDNVVDIIKAGGFQRLKAGSFENEATRVCVANTLKRLEMKVIGAARFLGNPMQVLNHLIYLMRSEEEVVQRRIAIALAYLCSPNDRKTIFINNNGLELLLGLLESPDIKQKGDASAALHHLAAKISSSFCLFEAAPPSPTPLMYLDEEYVNNSKHSDVTFVVEGRNFYAHRNCLLSSDIFRAMFDGSYREREAKHIVITDIKWDVFELMMRYIYTGSVDVNLDIAHDLLRAADQYLLDGLKRICENAIVQDISVENVSLMYKMSEDFNATTLKHACILFMLEKFDNLNSKPWYCPLIGRIVPDIRMFFSTKLVKKSRSAAW 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3007g00001 827 Gene3D - 18 466 IPR011989 -
Mupr3007g00001 827 ProSiteProfiles BTB domain profile. 662 728 IPR000210 GO:0005515
Mupr3007g00001 827 SUPERFAMILY ARM repeat 261 639 IPR016024 -
Mupr3007g00001 827 Gene3D - 467 546 IPR011989 -
Mupr3007g00001 827 Pfam Armadillo/beta-catenin-like repeat 425 463 IPR000225 GO:0005515
Mupr3007g00001 827 Pfam Armadillo/beta-catenin-like repeat 298 337 IPR000225 GO:0005515
Mupr3007g00001 827 Pfam Armadillo/beta-catenin-like repeat 340 376 IPR000225 GO:0005515
Mupr3007g00001 827 Gene3D - 550 637 IPR011989 -
Mupr3007g00001 827 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 309 344 IPR000225 GO:0005515
Mupr3007g00001 827 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 259 309 IPR000225 GO:0005515
Mupr3007g00001 827 SUPERFAMILY POZ domain 648 756 IPR011333 -
Mupr3007g00001 827 Pfam BTB/POZ domain 655 756 IPR000210 GO:0005515
Mupr3007g00001 827 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 248 822 IPR044282 -
Mupr3007g00001 827 SMART arm_5 465 505 IPR000225 GO:0005515
Mupr3007g00001 827 SMART arm_5 382 422 IPR000225 GO:0005515
Mupr3007g00001 827 SMART arm_5 298 338 IPR000225 GO:0005515
Mupr3007g00001 827 SMART arm_5 248 296 IPR000225 GO:0005515
Mupr3007g00001 827 SMART arm_5 69 124 IPR000225 GO:0005515
Mupr3007g00001 827 SMART arm_5 340 380 IPR000225 GO:0005515
Mupr3007g00001 827 SMART arm_5 589 629 IPR000225 GO:0005515
Mupr3007g00001 827 SMART arm_5 424 464 IPR000225 GO:0005515
Mupr3007g00001 827 Gene3D Potassium Channel Kv1.1; Chain A 646 787 IPR011333 -
Mupr3007g00001 827 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 476 518 IPR000225 GO:0005515
Mupr3007g00001 827 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 435 477 IPR000225 GO:0005515
Mupr3007g00001 827 SMART BTB_4 662 758 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3007g00001 Mupr-Chr3007 8603 19172 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3007g00001 22 252 Receptor kinase-like Gene Family AT4G23160 28.846 1.75e-18 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mupr3007g00001 BTB 1.3e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3007g00001 - - gmx:100783124 843.573