Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mupr299g00003 | ATGAAGATTAAGTGCAACGTGTGCGAGGGTGGGGAGGCCAAGGTTCTGTGTTGTGCTGACGAGGCTGCGCTGTGTTGGGAGTGTGATGAGAAGGTTCATGCGGCTAACAAGCTTGCCAGCAAGCACCAGAGAGTGCCTCTTTCTACCTCTTCCTCTCATATGCCCAAATGTGACATTTGTCAGGAAGCGTTAGGTTATTTTTTCTGTCTAGAGGATCGGGCTCTGCTCTGCAGAAAATGTGATTTGGCAATACACACTGCAAATGCTTATGTCTCTGGCCATCAGAGGTTTCTTCTCACTGGTGTAAGAGTAGGCCTTGAAGCTACGGAGCCTGGTGCTTCCTCAACTTCTTTGAAGTCAGATTCTGGGGAGAAAATTTCAGATACAAAGTCTTCTTCTGTCTCTAAAAAGGTTTCCACAATGCCCCAGCCATCAGATTACAATGAAGTGTTACCCGTTGAAGTTGGAGGAGTTGGGGAGTTTCCACCAGCTAAGGAGTCTTTTGGTGGTGGTTCTACAGCTGGAAATATCTCACAGTGGACAATTGATGAATTTATTGGCCTAAATGATTTCAGTCAGAATTATGATTACATGGAAGGGTCATCAAGGGCTGACAGAGGTATGCTTGGGGATTCTGATTCTCCTGTTTTAAGATCCGGCGAAGAGGAAATGGAGGATGATGATGACTACTTGGAACGTGTTCCAGATTCATCATGGACAGTTCCTCAGATCCATTCCCCACCTACAGCTTCTGGGTTATACTGGCCAAAAGACCCCCATTTTTCATCTGATAGTGTTCTTTCTGTTCCTGACATATGCTTTTCTCACATGCAACAACCTCAGATTAGT | 849 | 0.4547 | MKIKCNVCEGGEAKVLCCADEAALCWECDEKVHAANKLASKHQRVPLSTSSSHMPKCDICQEALGYFFCLEDRALLCRKCDLAIHTANAYVSGHQRFLLTGVRVGLEATEPGASSTSLKSDSGEKISDTKSSSVSKKVSTMPQPSDYNEVLPVEVGGVGEFPPAKESFGGGSTAGNISQWTIDEFIGLNDFSQNYDYMEGSSRADRGMLGDSDSPVLRSGEEEMEDDDDYLERVPDSSWTVPQIHSPPTASGLYWPKDPHFSSDSVLSVPDICFSHMQQPQIS | 283 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mupr299g00003 | 283 | Gene3D | Classic Zinc Finger | 1 | 92 | - | - | |
| Mupr299g00003 | 283 | MobiDBLite | consensus disorder prediction | 201 | 229 | - | - | |
| Mupr299g00003 | 283 | MobiDBLite | consensus disorder prediction | 110 | 149 | - | - | |
| Mupr299g00003 | 283 | ProSiteProfiles | Zinc finger B-box type profile. | 1 | 47 | IPR000315 | GO:0008270 | |
| Mupr299g00003 | 283 | SMART | bboxneu5 | 52 | 99 | IPR000315 | GO:0008270 | |
| Mupr299g00003 | 283 | SMART | bboxneu5 | 4 | 47 | IPR000315 | GO:0008270 | |
| Mupr299g00003 | 283 | FunFam | B-box zinc finger protein 22 | 1 | 93 | - | - | |
| Mupr299g00003 | 283 | Pfam | B-box zinc finger | 3 | 47 | IPR000315 | GO:0008270 | |
| Mupr299g00003 | 283 | Pfam | B-box zinc finger | 54 | 95 | IPR000315 | GO:0008270 | |
| Mupr299g00003 | 283 | MobiDBLite | consensus disorder prediction | 110 | 146 | - | - | |
| Mupr299g00003 | 283 | PANTHER | B-BOX ZINC FINGER PROTEIN 22 | 1 | 272 | - | - | |
| Mupr299g00003 | 283 | MobiDBLite | consensus disorder prediction | 236 | 255 | - | - | |
| Mupr299g00003 | 283 | CDD | Bbox1_BBX-like | 4 | 47 | - | - | |
| Mupr299g00003 | 283 | CDD | Bbox1_BBX-like | 56 | 99 | - | - | |
| Mupr299g00003 | 283 | ProSiteProfiles | Zinc finger B-box type profile. | 52 | 99 | IPR000315 | GO:0008270 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mupr299g00003 | Mupr-Chr299 | 16368 | 19904 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mupr299g00003 | 1 | 272 | C2C2-CO-like Transcription Factor Family | AT1G78600 | 50.325 | 6.43e-91 | 271 |
Transcription factors information