Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2975g00001 ATGAGTTCCGATAAACTCTCCTCTTCCGAGTCCCTCAACGGTTTGAAATTCGGCCAAAAAATCTATTTTGAGGATGTTAGTCTCGCCACTCCACCCACCTCTCTTACTTCTTCTTCTCTTGCCACTTCTTCTTCTTCTTCTTCTTCCTCTTCCTCTTCCAGGAAAGGAAGAGCTGGCTCTGTTCAACCACCTCAGCCTCCTAGGTGTCAAGTTGAAGGGTGCAAAGTAGATCTGAGTGATGCAAAAGCTTACTATTCAAGACACAAAGTCTGTGGCATGCACTCCAAATCCCCCACTGTCATTGTTGCTGGCCTTCAACAAAGATTTTGTCAACAGTGTAGCAGATTTCATCAGCTTCCTGAGTTTGATCAAGGAAAAAGAAGTTGCCGCAGGCGACTAGCTGGCCATAATGAACGTCGGAGAAAGCCCCCACCCAGCTCCCTATTGACCTCTCGCTATGCCAGATTTTCTTCGTCTGCTTTTGATAATAGTGGCAGAAGTGGCAACTTTCTGATGGAATTGGCTTCATACCCAAAGCTTAGTCTGAGAAATTCACTTCCAACTCCTAGATCATCCGAGCTAGCTCCTGGAAATCAAACCTCAACACTTAGCTGGCAGAGCAGCTCAGAGACACCATCTGACCTTTTCTTGCAAGGTTCAGTGGGTGGGACGAGCTTCGCCGGTCCCGGACATCCTCCAGGGGAAAGTTACACCGGGGTCACCGACTCGAGCTGTGCTCTCTCTCTTCTGTCAAGTCAAACATGGGGTTCTAGAAACACAGCACCAAGTCTTGGGTTGAATAACATGATAAATTTCAACGGGACACCCATGACACACCTTGCTGCATCATCTCATGGTGCATCAATCCACCAACTTCCAAATACCTCGTGGTGTTTCAAGGGCATTGATACTGGTAACTGTTCGCCCGAGGTTGTCCCTGATCTAGGTCTGGGTCAAATTTCACAGCCTCTCAATAGCCAAATTCCTGGTGAGCTGGATCTGTCCCACCAGGGCAGGAGGCACTATATGGATCTAGAACAGTCCAGGGCATATGAATCTGCTCAT 1065 0.4798 MSSDKLSSSESLNGLKFGQKIYFEDVSLATPPTSLTSSSLATSSSSSSSSSSSRKGRAGSVQPPQPPRCQVEGCKVDLSDAKAYYSRHKVCGMHSKSPTVIVAGLQQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPSSLLTSRYARFSSSAFDNSGRSGNFLMELASYPKLSLRNSLPTPRSSELAPGNQTSTLSWQSSSETPSDLFLQGSVGGTSFAGPGHPPGESYTGVTDSSCALSLLSSQTWGSRNTAPSLGLNNMINFNGTPMTHLAASSHGASIHQLPNTSWCFKGIDTGNCSPEVVPDLGLGQISQPLNSQIPGELDLSHQGRRHYMDLEQSRAYESAH 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2975g00001 355 SUPERFAMILY SBT domain 67 148 IPR036893 GO:0003677|GO:0005634
Mupr2975g00001 355 MobiDBLite consensus disorder prediction 32 72 - -
Mupr2975g00001 355 MobiDBLite consensus disorder prediction 32 59 - -
Mupr2975g00001 355 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 29 287 IPR044817 GO:0003677
Mupr2975g00001 355 MobiDBLite consensus disorder prediction 186 239 - -
Mupr2975g00001 355 FunFam Squamosa promoter-binding-like protein 14 60 130 - -
Mupr2975g00001 355 ProSiteProfiles Zinc finger SBP-type profile. 66 143 IPR004333 GO:0003677
Mupr2975g00001 355 Gene3D - 59 130 IPR036893 GO:0003677|GO:0005634
Mupr2975g00001 355 MobiDBLite consensus disorder prediction 186 220 - -
Mupr2975g00001 355 Pfam SBP domain 69 142 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2975g00001 Mupr-Chr2975 9259 13129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2975g00001 15 354 SBP-box Gene Family AT2G42200 45.879 1.16e-72 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mupr2975g00001 SBP 9.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2975g00001 - - gmx:100807165 619.002