LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr2968g00001	ATGATGTTTCCTTGGGTTGTGTTGCTTTTTCTTGCGTGCAATGTTCTTGTTGCACGTGTGAGCTCTGTGAGTGATGAAGGCTATGTGCTTTTGACACTGAAGAGGTCCATTTTGACAGACCCAGAAGGGTCCATGAGTAACTGGAACTCTTCTGATGACACCCCATGTTCGTGGAATGGGATCACATGCAAGGACCAAAGTGTTGTCTCCATTAGTATCCCAAAGAGGAAGCTTTATGGTGTTCTTCCCTCTGAGCTAGGGTCACTTTCCCACCTCCGTCATGTGAATTTGAGGAACAACAACCTCTTTGGGAACTTGCCTGCTGGGCTCTTTGAAGCTCAGGGACTGCAAAGTTTGGTGCTTTATGGCAATTCCTTTTCTGGGTCTGTTCCAGATGAGATTGGGAAGCTCAGGTACCTTCAAATTCTAGATTTGTCACAGAATTTCTTCAATGGGTCTTTACCTGCTGCAATAGTCCAATGCAAGAGGCTCAGAACAATGGTTCTTAGTCATAACAATTTCACAGGTCCACTGCCAGATGGGTTTGGTGGAGGGTTGTCTTCTCTTGAAAGACTTGACCTTTCTTTCAATGAATTCAATGGTTCAATTCCTAGTGACATGGGAAAGCTGTCAAGCCTGCAAGGCACTGTTGATTTGTCTCATAATCATTTGAGTGGTTCAATCCCAGCTAGTCTTGGCAATCTGCCTGAGAAGGTTTACATTGATCTCACTCACAACAATTTGAGTGGTCCAATACCTCAGACTGGAGCTTTGATGAATAGAGGGCCAACTGCTTTTATTGGCAATTCTGGTCTTTGTGGCCCCCCTTTGAAGAATCTGTGTGCCCCAGATACTCATGGTGCCGGTTCACCTTCCTCTTTTCCATTTTTGCCTGATAATTACCCACCTCAGGATGGTGATGATGGTTTTGGGAAAAGTGGGAAAAGTAAAAGGTTAAGTAAGGGTGCTGTGGTTGCCATTGTTGTGGGGGATGTAGTTGGAATTTGCCTTTTGGGTTTGGTGTTCTCTTACTGCTACTCAAGGGTTTGTGGTTTTACTCAGGATCAGGAGGAGAAATGTTTTGACAAGGGAGGGAGATTGAGGAAGGAGTGCTTATGCTTCAGGAAGGATGAATCTGAGACCCTATCTGATCATGTTGAGCAATATGATCTTGTTCCATTAGATGCTCAAGTGGCCTTTGATTTGGATGAGCTTCTTAAGGCTTCAGCTTTTGTTCTGGGAAAGAGTGGAATAGGGATTGTCTACAAAGTTGTGCTTGAAGAAGGGATCACCTTGGCTGTGAGAAGGTTAGGGGAGGGAGGGAAAGCTGGACTTGCCCAATTTACACCACTATCTTGGTCTGATAGAATGAAAATCATGAAAGGAATTGCAAAAGGATTGGTCCACCTGCATGAATTTAGTCCAAAAAAATATGTCCATGGAGACCTGAAGCCAGGTAACATACTGTTAGGATATAGCATGGAGCCACTCATTTCTGATTTTGGTCTTGGACGCCTTGCTAACATTGCTGGAGGATCTCCAACCTTGCAATCCAACCGAGTGGTGGTGGCAGAGAAATCGCAAGAAAGACAGAGGAGCTTATCCACAGAAGTTGCAACTAGTATTTTGGGAAATGGTTATCAAGCTCCAGAAACACTGAAGATGGTTAAGCCATCACAGAAATGGGATGTTTACTCATATGGTGTGATTCTGCTAGAATTGATTACAGGAAGATTGCCTATTGTCCAAGTGGGTAACTCAGAAATGGACCTTGTTCAATGGATTCAGTTCTGCATTGATGAGAAGAAGCCACTCTCAGATGTATTGGATCTGTATTTATCTGAAGATGCAGATAAGGAAGAGGAGATCATTGCAGTTTTGAAGATTGCAATTGCTTGTGTCCATAGCAGCCCAGAAAAGAGACCCATAATGAGGCATGTGCTTGATGCTTTGGATAGATTATCCACATCCTCTTGTTAA	1980	0.4374	MMFPWVVLLFLACNVLVARVSSVSDEGYVLLTLKRSILTDPEGSMSNWNSSDDTPCSWNGITCKDQSVVSISIPKRKLYGVLPSELGSLSHLRHVNLRNNNLFGNLPAGLFEAQGLQSLVLYGNSFSGSVPDEIGKLRYLQILDLSQNFFNGSLPAAIVQCKRLRTMVLSHNNFTGPLPDGFGGGLSSLERLDLSFNEFNGSIPSDMGKLSSLQGTVDLSHNHLSGSIPASLGNLPEKVYIDLTHNNLSGPIPQTGALMNRGPTAFIGNSGLCGPPLKNLCAPDTHGAGSPSSFPFLPDNYPPQDGDDGFGKSGKSKRLSKGAVVAIVVGDVVGICLLGLVFSYCYSRVCGFTQDQEEKCFDKGGRLRKECLCFRKDESETLSDHVEQYDLVPLDAQVAFDLDELLKASAFVLGKSGIGIVYKVVLEEGITLAVRRLGEGGKAGLAQFTPLSWSDRMKIMKGIAKGLVHLHEFSPKKYVHGDLKPGNILLGYSMEPLISDFGLGRLANIAGGSPTLQSNRVVVAEKSQERQRSLSTEVATSILGNGYQAPETLKMVKPSQKWDVYSYGVILLELITGRLPIVQVGNSEMDLVQWIQFCIDEKKPLSDVLDLYLSEDADKEEEIIAVLKIAIACVHSSPEKRPIMRHVLDALDRLSTSSC	659

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr2968g00001	659	SMART	LRR_typ_2	186	210	IPR003591	-
	Mupr2968g00001	659	SMART	LRR_typ_2	89	113	IPR003591	-
	Mupr2968g00001	659	SMART	LRR_typ_2	137	161	IPR003591	-
	Mupr2968g00001	659	Gene3D	Ribonuclease Inhibitor	19	78	IPR032675	-
	Mupr2968g00001	659	Gene3D	Transferase(Phosphotransferase) domain 1	444	658	-	-
	Mupr2968g00001	659	FunFam	Leucine-rich repeat receptor-like protein kinase	23	180	-	-
	Mupr2968g00001	659	SMART	serkin_6	412	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr2968g00001	659	MobiDBLite	consensus disorder prediction	292	314	-	-
	Mupr2968g00001	659	PANTHER	LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED	77	448	-	-
	Mupr2968g00001	659	Pfam	Leucine rich repeat	90	148	IPR001611	GO:0005515
	Mupr2968g00001	659	Pfam	Leucine rich repeat	163	224	IPR001611	GO:0005515
	Mupr2968g00001	659	Pfam	Leucine rich repeat N-terminal domain	25	63	IPR013210	-
	Mupr2968g00001	659	Pfam	Protein kinase domain	451	648	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr2968g00001	659	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	478	490	IPR008271	GO:0004672\|GO:0006468
	Mupr2968g00001	659	SUPERFAMILY	L domain-like	25	278	-	-
	Mupr2968g00001	659	SUPERFAMILY	Protein kinase-like (PK-like)	412	653	IPR011009	-
	Mupr2968g00001	659	FunFam	Leucine-rich repeat receptor-like protein kinase	188	283	-	-
	Mupr2968g00001	659	ProSiteProfiles	Protein kinase domain profile.	299	654	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr2968g00001	659	Gene3D	Ribonuclease Inhibitor	79	284	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr2968g00001	Mupr-Chr2968	5820	8276	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr2968g00001	1	654	Receptor kinase-like Gene Family	AT2G01210	61.399	0.0	864

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Mupr2968g00001		Pkinase	2.7e-19	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr2968g00001	-		-	gmx:100810225	1140.18