Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2965g00001 ATGTCTGTGAATCGAAGGCTTTCTGCTTCAAATGGTAGATTGCCATCGAATATGAAGTCTTGGAAGGTTAATGAGCCTTTGCATGGGTCTAATTCTCCCCGGACATGTAGGAGGAAGCCCTTGCTCCTTTGGTTTTTTGGCTTTGTTGCTATAGGGAGTTTTTGGTTCATCTTGAGTTTCAATAGTAAGTATTTGCTGAGCAAGGAGAATGAAGCAATTTGTGAAGAGAGAGCAAGAATCTTGCTACAACGCTACAATGTTAGTAGGAAACAGATTCATGCTTTGGCTTCCTTGTTCTCTGGATCAGATCAGATTTTATCCAACTGTATTGATGAAAGAAGACTTCAAATGCTGTTAAGCAGCGGCATGGTCAGCACTCCACAGTTAATGTGTCCGGAGAATCAGGAGTTACAAAAGGAGCATAGATGTGTTGCAGATACTGTAGAACCTATAGAACAATGCCCAATTCTTGATGATTATATCGAGACAAGGCTTGAATTATCATTCCCATTGAAAAATTACATATTATTGGGCTTGCAATCTGCACAGTCGACTGATTTGGTTAGTTATTTGCTCCGTGGAAAGAACATTTTGCAATCATGGGAACTGAGGGTCTCTACAATTTGGGATCGTGTGAGTTCATCTAATTTCGTTAGAGGATGCTGGTGGATACCCATTGGAATTATAATGTCCTGGTTCTGTTTACTATGGAGGAGTCAAAAGCAGAAGCTAGTTCAGGGGCATTCAGCTGCACAACAGAAGCGGCTGCAACCTTTTACACGGGGTCCTTCAAGGGGTGCTGGGAGGTGGAGGAAGAAGTTACTAGTTATATTTGTGTCACTTGGAATAATTGGGTCCATTTGGTTATTTTGGCACCTAAATATGGACATTATGCAGAGAAGAGAAGAAATGCTAGCCAATATGTGTGATGAGCGAGCCCGTATGCTGCAAGATCAGTTTAATGTGAGCATGAACCATGTTCATGCTCTGGCTATCCTTGTATCTACCTTTCACCATGGTAAACATCCTTCTGCAATTGACCAGAAAATTTTTGGAGAATATACAGAGAGTACAGCATTTGAAAGACCACTTACCAGCGGTGTTGCTTATGCTTTGAAAGTTCTCCACTCTGATAGGATGCATTTTGAGGAGCAGCATGGGTGGACAATTAAGAAAATGGAAACTGAGAATGAGGCATTAGTCCAAGATTGTATTCCACAAAATTTGGATCCAGCACCCATTCAAGATGAATATGCACCAGTGATATTTGCTCAAGAAACAGTTTCCCATATTGTATCTATTGACATGATGTCTGGGAAGGAAGACCGTGAGAATATTTTGCGAGCAAGGGCATCTGGAAAGGGGGTTCTGACATCCCCTTTTAAACTACTAAAGTCCAATCACCTAGGCGTCGTACTTACATTTGCTGTGTATAACACTAATCTTCCTTTAGATGCTACACCAGAGCAGCGTATCGAAGCTACTGTGGGGTATCTGGGTGCCTCTTATGATGTTCCATCACTGGTGGACAAGCTTCTGCACCAACTTGCCAGCAAGCAAACCATTGTTGTAAATGTTTATGACATAACTAATGCATCCTCACCTATCACAATGTATGGTACTGATGTTGCTGACACTGGCCTACTACACATAAGCAGCCTAGATTTTGGGGATCCGCGACGAAAACATGAGATGCACTGCAGGTTCAAGCAGAGGCCTCCATTACCTTGGACAGCAATCAATGCATCAGTGGGGGTGCTTGTTATTACTTTGCTTCTGGGTCATATTTTTTATGCAGCAATAAATAGAATAGCAAAAGTTGAGGATGACTATCGTCAAATGATAGTGCTGAAATGCCGTGCTGAAGCTGCAGATGTGGCAAAATCTCAGTTTCTTGCAACAGTTTCACATGAGATCAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGACACTGAGCTTGATGAAAACCAGTTGGATTGTGCCCAAACTGCCCACAAAAGTGGTAAAGAACTCATATCAGTCATAAATGAGGTTCTTGATCAGGCTAAGATTGAGGCAGGAAAGCTTGAACTTGAAGCTGTAGCTTTTGATCCACATGCTATTCTAGATGAAGTTTTATCACTTTTCTCTGGAAAATCTAATGAAACAGGAATAGAGTTGGCTGTTTATGCATCAAATCAAGTACCCGAAGTTGTCATTGGCGATCCTAAACGGTTCCGGCAAATAATTACTAATCTTGTTGGCAATTCATTTAAGTTCACTAATGATAAAGGACATGTATTTGTCTCGGTTCATCTGGCGAATGAAGTGAAGAACCCACTTCATATCATGGATGCAGTGCTAAGAGAAGGCTTAAACTTGAATCAGGACATATCAAACAGAACATATGATACATTAAGTGGGTTTCCTGTATGCAACAGATGGAAAAGTTGGGCAAATTTTAAGAAGTTAAGTGGCATAAATGAGCCTGAAATTATTCAACTACTAGTAATAGTTGAGGACACAGGTATAGGAATTCCTACAGATGCACAAAGCCGCATATTCACACCTTTTATGCAGGCCGACAGTTCCACCTCCCGAACATATGGTGGAACTGGAATAGGATTGAGCATTAGTAAATGTCTAGTGGACCTCATGGGAGGAGAAATTGGATTTGTAAGTGAGCCTGGAATTGGAAGTACTTTTTCCTTTACCGGAACTTTCAGAAAAGGAGGAAGCACGCCGATGGACTCAATGTGGCAGAATAATCTTTTTGGTTCTGAGTTCCAAGGATTGAGAGCATTAGTGGTAGATAGAAGAAAAATCCGAGCTGAGGTCACAAGATATCATCTGCAGAGATTGGGAATGTCTGTGGATGTAACTTACAGTCTGAATTCTGCATGCTCTTGTCTATCTAATACATGCAACATGAGTTTGTCGACCCAGTTGGCCATGATTCTTATAGACAAGGATTCTTGGGAGAAAGAACGTAGTATCTTATACACAATCAAGAAACATAGACAGAATGGCATCAAAGGGGATCCAATAAACTTACCAAAGATTTTTCTCATTGCTACTGACCTTAGCCCCAATGAACATGATGAGCTCAAGTCAGTTGGTATCATAGATGGTATACTAATGAAGCCTCTTTGGCTTAGTTCTTTGATGCGTTGTTACAGAGAATCCCTTGGCACAGGAAAAAAGCAAGTAAATAGGAAAAAATTATCCAAACTTGGGAAATTATTAATGCACAAACAAATTTTGGTGGTTGATGATAACGCAGTGAACAGAAAAGTTGCAGAAGGTGTTCTACAGCAATACGGGGCAATAGTTACCGCTGCGGAGAGTGGCAGGGCTGCCCTAAAGATGCTTAAACTGCCACATAATTTTGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGACGGTTTTGAAGCGACGAGGCAAATCCGGTCTCTGGAGAGCGAGGTAAATGAGAAAATTGCATGTGGTCAAGCAACGGCAGAGATGTTTGGTAGCATCTCTTACTGGCACATTCCAATATTAGCAATGACAGCAGATGCAACTCATGCTTCTAATGATGAGTGCATTAAGTGTGGGATGGATGACTACGTTTTAAAACCATTTGAAGAAGAGCAGCTCTACAGGGTGATGGCACGCATCTTCAAGATACTGATTTAA 3678 0.4125 MSVNRRLSASNGRLPSNMKSWKVNEPLHGSNSPRTCRRKPLLLWFFGFVAIGSFWFILSFNSKYLLSKENEAICEERARILLQRYNVSRKQIHALASLFSGSDQILSNCIDERRLQMLLSSGMVSTPQLMCPENQELQKEHRCVADTVEPIEQCPILDDYIETRLELSFPLKNYILLGLQSAQSTDLVSYLLRGKNILQSWELRVSTIWDRVSSSNFVRGCWWIPIGIIMSWFCLLWRSQKQKLVQGHSAAQQKRLQPFTRGPSRGAGRWRKKLLVIFVSLGIIGSIWLFWHLNMDIMQRREEMLANMCDERARMLQDQFNVSMNHVHALAILVSTFHHGKHPSAIDQKIFGEYTESTAFERPLTSGVAYALKVLHSDRMHFEEQHGWTIKKMETENEALVQDCIPQNLDPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVYNTNLPLDATPEQRIEATVGYLGASYDVPSLVDKLLHQLASKQTIVVNVYDITNASSPITMYGTDVADTGLLHISSLDFGDPRRKHEMHCRFKQRPPLPWTAINASVGVLVITLLLGHIFYAAINRIAKVEDDYRQMIVLKCRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTELDENQLDCAQTAHKSGKELISVINEVLDQAKIEAGKLELEAVAFDPHAILDEVLSLFSGKSNETGIELAVYASNQVPEVVIGDPKRFRQIITNLVGNSFKFTNDKGHVFVSVHLANEVKNPLHIMDAVLREGLNLNQDISNRTYDTLSGFPVCNRWKSWANFKKLSGINEPEIIQLLVIVEDTGIGIPTDAQSRIFTPFMQADSSTSRTYGGTGIGLSISKCLVDLMGGEIGFVSEPGIGSTFSFTGTFRKGGSTPMDSMWQNNLFGSEFQGLRALVVDRRKIRAEVTRYHLQRLGMSVDVTYSLNSACSCLSNTCNMSLSTQLAMILIDKDSWEKERSILYTIKKHRQNGIKGDPINLPKIFLIATDLSPNEHDELKSVGIIDGILMKPLWLSSLMRCYRESLGTGKKQVNRKKLSKLGKLLMHKQILVVDDNAVNRKVAEGVLQQYGAIVTAAESGRAALKMLKLPHNFDACFMDLQMPEMDGFEATRQIRSLESEVNEKIACGQATAEMFGSISYWHIPILAMTADATHASNDECIKCGMDDYVLKPFEEEQLYRVMARIFKILI 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2965g00001 1225 Pfam CHASE domain 345 539 IPR006189 -
Mupr2965g00001 1225 Gene3D - 1081 1223 - -
Mupr2965g00001 1225 SMART CHASE_2 342 541 IPR006189 -
Mupr2965g00001 1225 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 739 903 IPR003594 -
Mupr2965g00001 1225 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 681 903 IPR036890 -
Mupr2965g00001 1225 CDD HisKA 627 688 IPR003661 GO:0000155|GO:0007165
Mupr2965g00001 1225 CDD HATPase_EvgS-ArcB-TorS-like 744 903 - -
Mupr2965g00001 1225 FunFam Histidine kinase 4 599 690 - -
Mupr2965g00001 1225 PRINTS Bacterial sensor protein C-terminal signature 851 861 IPR004358 GO:0016310|GO:0016772
Mupr2965g00001 1225 PRINTS Bacterial sensor protein C-terminal signature 868 886 IPR004358 GO:0016310|GO:0016772
Mupr2965g00001 1225 PRINTS Bacterial sensor protein C-terminal signature 892 905 IPR004358 GO:0016310|GO:0016772
Mupr2965g00001 1225 PRINTS Bacterial sensor protein C-terminal signature 833 847 IPR004358 GO:0016310|GO:0016772
Mupr2965g00001 1225 PANTHER TWO-COMPONENT HISTIDINE KINASE 283 1214 - -
Mupr2965g00001 1225 SMART HKATPase_4 739 908 IPR003594 -
Mupr2965g00001 1225 Gene3D - 66 102 - -
Mupr2965g00001 1225 Gene3D - 293 345 - -
Mupr2965g00001 1225 SMART HisKA_10 627 692 IPR003661 GO:0000155|GO:0007165
Mupr2965g00001 1225 SUPERFAMILY CheY-like 926 1061 IPR011006 -
Mupr2965g00001 1225 Pfam His Kinase A (phospho-acceptor) domain 627 692 IPR003661 GO:0000155|GO:0007165
Mupr2965g00001 1225 SMART REC_2 1083 1217 IPR001789 GO:0000160
Mupr2965g00001 1225 Gene3D CHASE domain 346 573 IPR042240 -
Mupr2965g00001 1225 FunFam Histidine kinase 4 346 573 - -
Mupr2965g00001 1225 ProSiteProfiles Histidine kinase domain profile. 634 908 IPR005467 -
Mupr2965g00001 1225 SUPERFAMILY CheY-like 1083 1221 IPR011006 -
Mupr2965g00001 1225 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 616 693 IPR036097 GO:0000155|GO:0007165
Mupr2965g00001 1225 Gene3D - 691 908 IPR036890 -
Mupr2965g00001 1225 CDD REC_hyHK_CKI1_RcsC-like 1085 1217 - -
Mupr2965g00001 1225 ProSiteProfiles Response regulatory domain profile. 931 1061 IPR001789 GO:0000160
Mupr2965g00001 1225 Pfam Response regulator receiver domain 1085 1215 IPR001789 GO:0000160
Mupr2965g00001 1225 ProSiteProfiles CHASE domain profile. 342 566 IPR006189 -
Mupr2965g00001 1225 Gene3D - 598 690 - -
Mupr2965g00001 1225 ProSiteProfiles Response regulatory domain profile. 1084 1221 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2965g00001 Mupr-Chr2965 3132 11795 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2965g00001 37 160 Miscellaneous Gene Families AT5G35750 27.152 3.33e-06 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr2965g00001 CHASE 1.7e-33 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2965g00001 K14489 - gmx:100805107 2193.31