Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2961g00001 ATGGAGTTTGTGGGGAAAACCGTTAGGAAAGAGGTGAAGGAGGTTGGGTTTATCTCGGGAACAGTGAAATCTTACGACCCTTCCTCTGGGTTTTTCGAGATCGTTTACGAAGACGGTGATTCTGAGGAGTTGGAGTGCTCTGACGTGGCTTCTCTTTTGCAATTTCAACCGAAGCTTGCCAAGGCCAAGCCGCGGGTTGGTCGGAAACCTAAGAAGCGCCGTCGTGTCGAGCGGAAGCGCGAGACCGGAGCCGGTTCAGGTAATGTTAGCGAGAATTCGGTGCCGGAGGGTAGTGATTTTAGGGGGGTTTTGGATGGTAATGCTTCTTTTGCTGATAGGAGTTTGGAATTAGGTTGTGATGGGTTTGAGAGAGCCTTGGATATGGGAATTAGGAATGGAGGGAATCTTATGGGCAATGCGAATGGGACTGTGAAGGAAAACGGGGGTAGAGAAACTCTGGGAGAGGAAATTGGTTTTGAAGATAGTTTGAACCAGAGTGTCTCTGCTAATGGTAGTTGTGTCAAGGATGTGCTTGATTTGAATGCTAGGCTTAATCTCAACGAGGATTTCAATCTTAATGATGCGTGCAGTTTGCCTTTAGACACTGAGGATAGTTTGAAGAGAAGAGATTGTATTGATTTGAATTTGGATGTGAGTAATGAGGACAATATTGGTCCAAATGTGGGTTACTTGGGTTGTTCGGGAGGGGAGGCATTGCAGCGGGAATGTAATTTTGATTTGAATGTGGAGGTATGTGAAGACGTGAAGGAAACTCAGTGTGATGCTGATGGAAATGGACATACTGAGGTAGGTGATACTTTGTTTAGTAAGATGGGGCAGCTTCAAAAGGAAGAGATAAATGTTAATAATAGTTCTGTAGAAGATGATGATGTTCAAGGTAGTTTAAATCACGACTCTGATGCTGTTAAATTGGAGGTAGTTCACGTTTCTGCTGCTCATGCGGCTGAAGATGGTTTTTTGTGTTTGGTTGAGGAAAATGGAGGTGATGATGGCAAAGAAGATGCAGCAGCTATTGATTCTCATCAGGTTTCAAATGCAATTTCTGTTAGGGATTCGGATTCTGTGGAGGTCCAGCGAATAGATTGTCCCTCTGAAGGTGGTTTTCCCATAATTCATGAATACCAAGATGATCCAGGAAATCCGTGTGAACAAGAAAATGGTCGAAGGAAAAGAAGAAAATTATTAGATAATCCAAAAGCCACACCAGAGACAGTTTTAAGGAGGAGTTCTCGTCGGGCATCAGCTAGAAAACGGGTTTCAAGCACCATAGAAGTGGAGGTGACTGATGATCCTTTGTTGTCCTTGGGAACCAGTGCCTTAACGGAAGAAAAGCCTCTAATCCCTGATTCTCAGAAATATGAGCAATGCAATGATCCTCTTCCAAAGCTGCAACTTCCACCATCTACTGCAAGTTTGAATTTACACGATGTTCCTGTTCTTGAACTTTTTTCTATTTATGCCTGTTTAAGATCATTCAGCACTTTATTGTTTTTGAGTCCATTTGAGTTGGAGGATCTTGTAGCTGCACTGAAGTCTGAAATCCCAAGTATGTTATTTGACAGCATTCATGTTTCTATTTTGCAAACTCTGAGAAAGCATTTGGAATACCTTTCCAATGAGGGTTGCCAATCTGCGTCCAATTGCCTGAGGAATCTTAACTGGGATTTTTTGGACCTGGTCACATGGCCTATTTTCATGGCCGAGTACCTTCTGATTCATGGCTCAGGACTTAAAACTGATTTTGATCTTAAACACCTAATGTTCAGAACTGATTACTACAAACAACCTGTAATTGTGAAGGTTGAAATTCTTCAGTACCTGTGTGATGATATGATTGAATCGGAAGCCATAAGGTCAGAGCTTAATAGAAGATCTTTGGTAACTGAGACTGATATGGGTTTTGATCAGAATATGTATTTTGACACTTGCAAGAAAAAAAGAGCTGTAATGGACGTGTCTGGTGGCTCTTGCTTGACTGAGGAGAATGTGGATGACACAACTGACTGGAACAGTGATGAATGTTGCCTGTGCAAAATGGATGGTAGTTTAATATGTTGTGATGGTTGCCCTGCTGCATTCCACTCAAGATGTGTGGGAATAGCCAGTGACAATCTGCCTGAAGGTGACTGGTATTGCCCCGAGTGTGGAATTGGCAAACGCAGGGCTTGGATGAAATCACGAAGGTCACTTCGTGGAGCAGATTTATTAGGGATTGATCTGGATGGCCGTCTCTATTTTAACAGCTGTGATTACCTGTTAGTGTCAAACTCATCTGAAGCAGGGTCATTGTTCAATTACTACCACAGTAATGATCTACACGTTGTGATTGAAGCTTTAAAATCTATGAATCCTTTATACGAAGGCATACTAATGGCTCTCTATAAGCATTGGGATATCAGTGCAAACTTGAGTGTGGGGGATAGTGTCTTTAATCAAAGTTCCTGCAAGAACATGCAGATGAAGGGAGAATATTATACCATGCATGCATCTTTAGCACCTTTTACTTCGGAGACATGTTTGGACAAGAATCGGGCTAATGATCAAAGAAAGTTGGATGAAAATTCAACTATTGACTGTGGTATGCATCTTGGCGAAGAGTTTCCAAAAGCTGGGAACCGCCTAGACTCAATGACCACCATAGAAAGTCCTTGTGTTGCTTCAGAAGGATCTGCTGATACCGCACAGATGAGAACAGGCATCGACAATGTTCAGATATATGGGGTCAATGATTCCAATAGATGTGAGGAATCCTTGAATCAGCCAGGAATGCCAGAAAGACGCCATCCTGTTCGTGACTGTTCTTTGACATCTTCCAGCTTAGATGTGGGACGTAAAATAAACTTAAGATCTGTAGGTGTTAGCAGTATCCCCTCCACGGACAATAAGGATACTTCAGTAGCACCTCGTGGAATTGAGTACATAAACTATTACAGCTTTGCCCGAACGGCTTCATTTGTTGCTCAGGAGTTGATGTGTAAGTCACCTGAAAAGATGAATAAGATTTTTGCAATGTCTGAAGAAGAAATTATTTCAGACCAAGCAAAAGTCATTATGAAGAAATCTACTAACTTTTGTTGGCCAAGTATTCAGAACCTGCATGCAGCTGCCCAAAAGGAAAAATGTGGGTGGTGCTTTACTTGCAAAGTTGCAAATGAAGACAGGGATTGCTTGTTTAATTCTGTGGTGAAGCCTGTTTGTGAAGTTTCTAATAGTACTTTATCTGGGCTTCAACCCAGGAAGATCCAAAATGGACATCTTAGAGATATCATATGTCATATCTTCTCTCTTGAGGTTCGATTACGTGGGCTTTTGTTGGGTCCGTGGTTGAATCTGCATCAAACTAATCTTTGGCAAAAGGATCTTTTGAAGTCATCTGATTTTCTTCCTGTTAAACGATTATTGCTTCTTTTAGAATCAAATTTGCGGCCTCTTGCACTTTCAGCAGATTGGTTAAAGCATGTGGATTCTGTTGGTACAATGGGATCTGCTGCTCATATTGTGGTCAGTTCATCACGCACATCTTCAAGGCATGGTATTGGAAGGAAAAAGGCTAGATATTCAGATATCGAAACCAGTTCATCTTCAAACACTGCTAGTGGTTTGGGGATGTACTGGTGGAGAGGTGGCAGGCTTTCCCGAAAATTGTTTAATTCGAAGGTTTTGCCTCACTCCTTGGTTACCAAGGCTGCTAGACAAGGTGGGTGTAGGAAGATACCAGGCATTTTATATCCCGAGAATTCAGATTTTGCACGGAGAAGCAGATATGTTGCCTGGCGAGCTGCTGTTGAGATGTCAACAAGTGCTGAGCAGCTTGCTTTACAGGTTAGAGAGCTTTATTCAAACATAAGATGGCATGAAATTGAGAACAACCATCCCCTATATGTGTTGGACAAGGAATCTAGAAAATCAGTCAGGCTGTTCAAAAAAGCAATTGTACGCAGGAAGTGCACTGAAGGGCAATCTGTGAAATACCTTATTGATTTTGGGAAGAGAAGGGCTATTCCAGATGTTGTCATTAAACATGGTTCTTTGTTGGAACAATCCTCCAGTGAGAGAAAAAAGTATTGGCTGGAGGAGTCTTATGTTCCATTGCATCTTCTAAAGAATTTTGAGGAAAAAAGAATTGTCCGCAAGTCCACTGATAAGAAATTTGGAAAAATTCTTGAGATTGGTAGAGTAAACAAGAAAATTCCTCAACAAAGGGGATTTTCATATTTGTTTACCAGATTGGAAAGATCTGATTGTCATCAGTGTGGGCACTGCAACAAAGATGTTGCAATGAGGGATGCTGTGAGGTGCCTTCATTGCAAAGGATACTTCCACAAGAGGCATGTCAGTAAATCAGGGGGCACAAGAACTGCTGGAAGCATGTATTCATGTCATAGATGTCAGGATGGGTTGCGTGCAAAGACTAATACTAATAAAAGGAAAATTGACTCAAAACTGCAGAAGATTCAAGCAAAGAAACGTAAAACTGTACCTTCTGTTTGTAAATCAGTGAACCTCAAGGGCAATAAAAAGGCATTGAGTAAGTTACGACAGGTGAGATCTCGAAACAGTAAGAATATCCCATCAAGTGTACCTCTTCGCCGTTCTACTAGGAAGGCCAAATCCTTGTATATGCAAAGTCAAATGAATGGAGGACATAAAAAAGGAAAGCAAAGTAAAAAGAATGCGGGACGTAAAAAGGGAAAGCAAAGTAAATCCAAGAAGGTGACCTCTCTGAAGTCCAAGGAAACTACTAGTCAATATAAGAAGTTGGTAGTAACTACTGCAAGTAAGAAGAGAACAAAAATCTGTAACAGTTACTGGCTTAATGGTCTTCAGTTGTCTAGAAAGCCAAATGATGAACGAGTAATGCTGTTTAAAGAGAAAAAGCGTGTTGTCTCCTCTGAAGATTTTTCTGGCTCTCTTGATTATCCTAAATGTTGCCTTTGTTGTGAAAATGGATGCACCTTGAATTATATTGCGTGTGAATTCTGTGGAGGTGACTACTTTTCTTCTGGTTTGGGATGGGTGGGGAAAGGAGAGGCTAACACTTGTTGCACATTTACAAAATAA 5082 0.4142 MEFVGKTVRKEVKEVGFISGTVKSYDPSSGFFEIVYEDGDSEELECSDVASLLQFQPKLAKAKPRVGRKPKKRRRVERKRETGAGSGNVSENSVPEGSDFRGVLDGNASFADRSLELGCDGFERALDMGIRNGGNLMGNANGTVKENGGRETLGEEIGFEDSLNQSVSANGSCVKDVLDLNARLNLNEDFNLNDACSLPLDTEDSLKRRDCIDLNLDVSNEDNIGPNVGYLGCSGGEALQRECNFDLNVEVCEDVKETQCDADGNGHTEVGDTLFSKMGQLQKEEINVNNSSVEDDDVQGSLNHDSDAVKLEVVHVSAAHAAEDGFLCLVEENGGDDGKEDAAAIDSHQVSNAISVRDSDSVEVQRIDCPSEGGFPIIHEYQDDPGNPCEQENGRRKRRKLLDNPKATPETVLRRSSRRASARKRVSSTIEVEVTDDPLLSLGTSALTEEKPLIPDSQKYEQCNDPLPKLQLPPSTASLNLHDVPVLELFSIYACLRSFSTLLFLSPFELEDLVAALKSEIPSMLFDSIHVSILQTLRKHLEYLSNEGCQSASNCLRNLNWDFLDLVTWPIFMAEYLLIHGSGLKTDFDLKHLMFRTDYYKQPVIVKVEILQYLCDDMIESEAIRSELNRRSLVTETDMGFDQNMYFDTCKKKRAVMDVSGGSCLTEENVDDTTDWNSDECCLCKMDGSLICCDGCPAAFHSRCVGIASDNLPEGDWYCPECGIGKRRAWMKSRRSLRGADLLGIDLDGRLYFNSCDYLLVSNSSEAGSLFNYYHSNDLHVVIEALKSMNPLYEGILMALYKHWDISANLSVGDSVFNQSSCKNMQMKGEYYTMHASLAPFTSETCLDKNRANDQRKLDENSTIDCGMHLGEEFPKAGNRLDSMTTIESPCVASEGSADTAQMRTGIDNVQIYGVNDSNRCEESLNQPGMPERRHPVRDCSLTSSSLDVGRKINLRSVGVSSIPSTDNKDTSVAPRGIEYINYYSFARTASFVAQELMCKSPEKMNKIFAMSEEEIISDQAKVIMKKSTNFCWPSIQNLHAAAQKEKCGWCFTCKVANEDRDCLFNSVVKPVCEVSNSTLSGLQPRKIQNGHLRDIICHIFSLEVRLRGLLLGPWLNLHQTNLWQKDLLKSSDFLPVKRLLLLLESNLRPLALSADWLKHVDSVGTMGSAAHIVVSSSRTSSRHGIGRKKARYSDIETSSSSNTASGLGMYWWRGGRLSRKLFNSKVLPHSLVTKAARQGGCRKIPGILYPENSDFARRSRYVAWRAAVEMSTSAEQLALQVRELYSNIRWHEIENNHPLYVLDKESRKSVRLFKKAIVRRKCTEGQSVKYLIDFGKRRAIPDVVIKHGSLLEQSSSERKKYWLEESYVPLHLLKNFEEKRIVRKSTDKKFGKILEIGRVNKKIPQQRGFSYLFTRLERSDCHQCGHCNKDVAMRDAVRCLHCKGYFHKRHVSKSGGTRTAGSMYSCHRCQDGLRAKTNTNKRKIDSKLQKIQAKKRKTVPSVCKSVNLKGNKKALSKLRQVRSRNSKNIPSSVPLRRSTRKAKSLYMQSQMNGGHKKGKQSKKNAGRKKGKQSKSKKVTSLKSKETTSQYKKLVVTTASKKRTKICNSYWLNGLQLSRKPNDERVMLFKEKKRVVSSEDFSGSLDYPKCCLCCENGCTLNYIACEFCGGDYFSSGLGWVGKGEANTCCTFTK 1693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2961g00001 1693 MobiDBLite consensus disorder prediction 1557 1578 - -
Mupr2961g00001 1693 MobiDBLite consensus disorder prediction 385 405 - -
Mupr2961g00001 1693 MobiDBLite consensus disorder prediction 1522 1556 - -
Mupr2961g00001 1693 MobiDBLite consensus disorder prediction 63 78 - -
Mupr2961g00001 1693 ProSiteProfiles Zinc finger PHD-type profile. 678 725 IPR019787 -
Mupr2961g00001 1693 SMART PHD_3 680 723 IPR001965 -
Mupr2961g00001 1693 SMART PHD_3 1424 1471 IPR001965 -
Mupr2961g00001 1693 MobiDBLite consensus disorder prediction 63 98 - -
Mupr2961g00001 1693 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 607 629 IPR028942 -
Mupr2961g00001 1693 PANTHER PHD FINGER FAMILY PROTEIN 2 1679 - -
Mupr2961g00001 1693 ProSiteProfiles DDT domain profile. 483 543 IPR018501 -
Mupr2961g00001 1693 MobiDBLite consensus disorder prediction 1519 1585 - -
Mupr2961g00001 1693 SMART testlast3 483 543 IPR018501 -
Mupr2961g00001 1693 Pfam DDT domain 487 539 IPR018501 -
Mupr2961g00001 1693 ProSitePatterns Zinc finger PHD-type signature. 681 722 IPR019786 -
Mupr2961g00001 1693 MobiDBLite consensus disorder prediction 381 420 - -
Mupr2961g00001 1693 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 666 740 IPR013083 -
Mupr2961g00001 1693 CDD PHD1_AIRE 680 722 - -
Mupr2961g00001 1693 CDD Tudor_AtPTM-like 4 54 IPR047365 -
Mupr2961g00001 1693 Pfam PHD-finger 681 722 IPR019787 -
Mupr2961g00001 1693 SUPERFAMILY FYVE/PHD zinc finger 666 729 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2961g00001 Mupr-Chr2961 2293 13454 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2961g00001 1 1678 PHD Transcription Factor Family AT5G12400 40.936 0.0 1079
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Mupr2961g00001 DDT 2.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2961g00001 - - gmx:100800973 2838.91