Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2960g00004 ATGAAGAGGGTAAATTGGGTATATCGCCGGAGACCGCGGAAGCAGATCGGCGGCGAGGAGGATATGGACGACGACGACGAGATCCAGTCGCATCCGTCGCCGGCGAGCGGATCCCCGGCATCCTCGCCGCGGGCGAACGGTCGGATAACGGTGACGGTCGCGGCTCCGGCGCCGCAGCCGGCGCCGAACAGCCTGGCATTAGCGCTTCCGATTCAGCAGCCGCCGAAGGGGAACGGCGGAGGAGGAGGCGGCGGAGGGAGGGAGGATTGCTGGAGCGAAGGCGCGACGGCGGTGCTGATCGATGCGTGGGGAGAGAGGTATCTGGAACTGAGCAGAGGAAATCTGAAGCAGAAGCACTGGAAGGAGGTGGCGGAGATCGTGAGCGGCAGAGAGGATTACACGAAGGCGCCGAAGACCGACATCCAGTGCAAAAACCGGATCGACACCGTCAAGAAGAAGTACAAATCGGAGAAGGCGAAGATCGCCGCCGGCGCGACCAGCAAGTGGCCGTTCTTCAACCGGTTGGACCTGCTGATCGGTCCAAGCGCCAAGATCCCAGGCGCCGGCGGTACCAGCGCCGCGGGGAACAGTAATTTACAATCGCAGAAAGTGCCGTTAGGGATTCCGGTCGGCGTTCGCGTCAGCACGAATCAGTATCACCATCCTCAAAAGCCGCCGCCGCAGCAACCGCAAGCGGTTCCGCTGAAGAACCAGAAGATTCAGTTCCGGCGCCGCGGTCCTCCGGTGGAATCCGATTCGGAGGAGCGAGAAGCGTCGTCGCCGGCATCGAGCGACAGTTTTCCGCCGGAGAGCTTCGAGAGGAAGAGGCCGCGGTTGACGAGTTCGAACGCTGCGAAAGGAAGCGAAGGAGGAGGGAAGGGTAAGGGTTGGGGAAGCGCGGTGAGGGAATTGACGCAGGCGATTCTGAAATTCGGCGAGGCTTATGAACAAGCGGAGAACTCGAAGCTGCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAGTTCGCTAAGGATTTGGAGTTGCAGAGAATGCAGTTTTTCATGAAGACTCAATTGGAGATTTCGCAGCTCAAGCTTGGGAGGAAAGGTGCTAACCCTAGCAATCACCTTAGCACCAGCAACAATAACAATAACAACAATCATCATAACAATAATAGCGACAGTGAGTGA 1173 0.5874 MKRVNWVYRRRPRKQIGGEEDMDDDDEIQSHPSPASGSPASSPRANGRITVTVAAPAPQPAPNSLALALPIQQPPKGNGGGGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVAEIVSGREDYTKAPKTDIQCKNRIDTVKKKYKSEKAKIAAGATSKWPFFNRLDLLIGPSAKIPGAGGTSAAGNSNLQSQKVPLGIPVGVRVSTNQYHHPQKPPPQQPQAVPLKNQKIQFRRRGPPVESDSEEREASSPASSDSFPPESFERKRPRLTSSNAAKGSEGGGKGKGWGSAVRELTQAILKFGEAYEQAENSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQLEISQLKLGRKGANPSNHLSTSNNNNNNNHHNNNSDSE 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2960g00004 390 FunFam trihelix transcription factor ASIL2 91 156 - -
Mupr2960g00004 390 MobiDBLite consensus disorder prediction 362 390 - -
Mupr2960g00004 390 Gene3D - 91 156 - -
Mupr2960g00004 390 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 48 360 IPR044823 -
Mupr2960g00004 390 Pfam Myb/SANT-like DNA-binding domain 88 177 IPR044822 -
Mupr2960g00004 390 MobiDBLite consensus disorder prediction 243 259 - -
Mupr2960g00004 390 MobiDBLite consensus disorder prediction 360 390 - -
Mupr2960g00004 390 MobiDBLite consensus disorder prediction 183 298 - -
Mupr2960g00004 390 MobiDBLite consensus disorder prediction 1 89 - -
Mupr2960g00004 390 MobiDBLite consensus disorder prediction 31 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2960g00004 Mupr-Chr2960 36218 37774 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2960g00004 22 384 Trihelix Transcription Factor Family AT3G14180 46.875 2.89e-109 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mupr2960g00004 Myb_DNA-bind_4 2e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2960g00004 - - gmx:100812599 489.96