Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2960g00002 ATGGCTGATTCTTTTTCCTTCGAGGGTGACTCCTACACAAGCCACCAGGGACGACACTATCCAACACCAGTGAGTTATCACAGTATGTCTGGCTCTGGCTCTGGCTCTTTTATACCATCTAACTCTCAAAGCAATGCCACTTCCAGAACCACAAGATCTCGCCACAACCGAGTTCCTGCCACACCCTTTGCTTCAGATGATGACCATTCATGGAAAGAAGAGGTTTCATGGAAGTTTGAGGCGACAGGGTGGCGCGATTATAGCACAAACTTCGGTTCTGTTCTGAGTCCATGGCCAGCTAGCTCCCCTTCTGATCGCAGCCGTGTGTTCCGTCGATCAGCCAATGACTACTACCTCTCTAGGACAAGTAGGTTCAGAGGTCTCACAAGTTATGAACATTCTGGCTATGGTAGAGTTGAACTTCACAGCTATGTTGCTGCTAGGGACAATGATTATGGTTACTTTGACCAGCATAGCCAGCCTCATGGATTGTCAAAATTGGGGATAATCCAAGACAGGAGTAGTAGGAAAGGTAAGACTAGTCCATTGGCTGAGGAAGATGAGCTTAGTATGATAGATTATAGCATAACACAAGATCATGTTATTTCACCTAATAGCAATGGTCATGGTCATGGTCTTGAATCCCCATATTTTAAACATGGTCATGGGGATTATGTTGGTCATGGACTACTATCACATGATAGCCAATTTTATAGAAGTGGTGGTGGTGGTTATAGTCACCATGACATTGACAAGTTTTCAGAATATGATGAAGAAGGTGAGGAGGACATGGATGAGGAAGATGCAAGGCCTCCAAAGACAGTTGGGCTCTTGAGCTTGTTTAGGTACTCAACAAAGTTGGATTGGGTGCTTGTGTTTGTGGGGTGTTTAGGGGCTCTCATAAATGGAGGATCACTTCCCTGGTACTCTTATCTTTTTGGAGACTTGGTCAATAAGATTTCAGAAGCTGACAAGGACAAAACACAAATGATGAAGGATGTGGAAAAGATATGCATATTTATGGCCGGGCTAGCTGCTCTTGTGGTATTTGGAGCATATTTGCAGATCACATGTTGGAGGTTAGTGGGGGAGCGATCTGCTCAAAGAATCAGAACCGAGTATCTTAGAGCGATTCTTCGACAGGACATTACTTTTTTTGATACAGATATCAACACTGGTGATATTATGCATGGAATTGCTAGTGATGTTGCACAAATTCAAGAAGTTATGGGGGAGAAGATGGCCCACTTCATTCATCATATATTTACATTCATATGTGGGTACGCAGTTGGGTTTAGAAGATCATGGAAAGTCTCTCTGGTGGTATTCTCAGTCACTCCATTGACAATGTTCTGTGGCATGGCTTACAAAGCACTTTATGGTGGCCTAACAGCAAAAGAGGAAGCTTCTTATAGGAAAGCTGGCAGCATTGCGGAGCAGGCCATCAGTTCAATTAGGACAGTGTTTTCATTTGTTGCAGAAAGCAAATTGGCTGGAAAATATGCTGAACTACTACAAAACTCAGCTCCAATAGGGGCCAAAGTTGGTTTTGCTAAAGGTATAGGCATGGGTGTGATCTACTTAATAACCTATTCAACATGGGCACTGGCTTTTTGGTATGGCTCTATATTAATTGCCAGGAATGAACTTGATGGAGGTTCAGCTATTGCTTGTTTCTTTGGTGTCAATGTAGGGGGAAGAGGCTTGGCACTGGCACTTTCATATTTTGCACAATTTGCACAAGGGACTGTTGCAGCAAGCCGTGTATTCTTTATTATAGAGAGAATCCCTGAGATTGATCCCTATAGCCCTGAGGGTAGGAAGCTTTCTGTTGTTCGTGGAAGGATTGAGTTAAAAAGTGTTAGTTTTGCATATCCATCTCGTCCTGATTCTCTGATACTTCATTCCCTTAACTTGGTATTACCATCTTCAAAAACTGTGGCATTGGTTGGTGCTAGTGGTGGGGGAAAGTCCACTATCTTTGCTCTCATAGAGAGGTTTTATGACCCTATTGAAGGGATTATTACCTTGGATGGTCATGATTTGAGGACATTGCAAGTAAAGTGGCTTCGTGATCAGATTGGGATGGTTGGTCAGGAGCCAATTCTCTTTGCCACATCTATACTGGAAAACGTGATGATGGGGAAAGATAATGTCACAAAGGAAGAGGCAATTTCTGCTTGCGTTGCTGCTGATGCTCACAGCTTCATCTCTAGCCTACCACTAAGCTATGACACTCAGGTGGGAGATAGGGGTACAAAACTCTCAGGAGGTCAAAAGCAGAGAATTGCACTGGCTCGAGCAATGATCAAAGATCCTAAAATCCTTCTTCTAGATGAACCAACTAGTGCTCTTGATGCTGAGTCAGAGTCTGCGGTTCAACGAGCCATTGACAAGATATCTGCAGGCCGAACAACCATTGTGATAGCTCACAGGATAGCAACAGTGAAGAATGCTGATGCCATTGTGGTTCTTGAACATGGTTCTGTCACTGAGATTGGTGACCATCGCCAGCTTATGGCGAAAGCAGGAGCATACTACAACCTTGTCAAGCTTGCCACCGAAGCCATTTCAAAACCTCAATCTATTGAAAATGGCATGCAAAAGGCCAATGATTTATCCATCTATGATAAATCTGTTGCTGGTTTATCAGGATCAAGATATGTAGTTGATATCCCAAGGCCTAAAGACTTAATATATAGGGATGAGGAGGAGAAACAAGAAGACATGGGAGATATGCAAGACAAAAAGGCAAGAAAATACAGACTATCTGAGGTATGGAAATTGCAAAAGCCAGAGCTTGTGATGCTATTTTCAGGACTTCTTCTGGGAATGATTGCTGGTGCTATCCTGTCCCTTTTCCCATTGGTTTTAGGCATATCCTTGGGAGTATATTTTGGCCATGACACTCATAAGATGAAAAGAGATGTTGGGCACCTTTGTTTAGTACTTGTTGGCCTTGGATTTGGTTGCATACTTTCCATGACAGGTCAGCAAGGTTTCTGTGGTTGGGCTGGATCAAAGTTGACACAGAGAGTTAGAAACCTCTTGTTTAAGTCCATACTGAAACAAGAACCTGGGTGGTTTGACTTTGATGAAAACTCCACAGGAGTGTTGGTGTCAAGGCTCTCATTAGACTGTGTTAGTTTTCGATCAGTACTTGGTGACAGATTCTCAGTCCTTCTTATGGGGTTGAGTTCAGCTGCTGTTGGCCTTGGTGTGTCCTTTTTCTTCAATTGGAGACTAACCCTTGTGGTAGCTGCTGTAACTCCTTTCACACTTGGTGCAAGCTACATAAGCTTGATCATAAACATTGGACCACGAGTCGATAACGAATCTTATGCCAAAGCTAGTAACATTGCTTCTGGTGCAGTGTCAAACATAAGGACGGTTACTACATTTTCTGCCCAGGAACAGATAGTTAAGTCCTTTGATGGAGCCCTGTCAGAACCTAGGAGAAAGTCATTGAGAAGTTCACAACTTCAAGGTTCCATATTTGGGTTGTTTCAAGGTGCCATGTATGGAGCATACACCTTAACTCTCTTGTTTGGTGCATACCTTGTAGAACATGACAAGGCAAAACTTGGGGACGTGTTTAAGATTTTTCTCATTCTTGTTCTGAGCTCATTTTCTGTGGGACAACTAGCTGGTTTGGCACCAGATACTTCTATGGCCACTACAGCAATTCCTGCAGTTCAAGATATCATAAACCGTAGGCCACTGATTGACAATAATAGAACAAAAGGTAGGAAAGTAGAAAGATCAAAGCCGTTCAACATAGAATTCAAGATGGTGACATTTGCATACCCATCTAGGCCAGAAGTGACTGTGTTGAGGGATTTCTGTTTAAAGGTCAAAGGTGGAAGCACAGTGGCCTTGGTGGGACCAAGTGGATCTGGGAAGTCAACGGTCATATGGTTGACACAGAGGTTCTATGATCCTGATCAAGGAAAGGTGATGATGAATGGGATAGATATGAGGGAGATTGATGTGAAGTGGTTGAGGAGGCAAATGGCTTTGGTGGGTCAAGAACCTGCATTGTTTGCTGGGAGCATAAGGGACAATATTGCATTTGGGGACCCAAATGCTTCATGGGCTGAAATTGAAGAGGCTGCAAAGGAGGCTTACATCCACAAGTTCATAAGTGGCCTTCCTCAAGGTTATGAAACCCAGGTTGGTGAAAGCGGGGTCCAGTTATCAGGTGGCCAGAAACAAAGAATTGCTATAGCAAGGGCCATATTGAAGAAATCAAGGGTGTTTTTGCTTGATGAAGCAAGCAGTGCCTTGGACTTGGAATCAGAGAAGCACATCCAAGATGCCCTTAAGAATGTTACCAAAGAGGCAACAACCATAATAGTTGCTCACCGTCTTTCCACAATCAGAGAAGCTGACAAGATCGCAGTTATGAGAGATGGGGAAGTGGTGGAGTACGGAAGCCATGACACTCTCATGGCTTCCATTCAAAATGGCTTATATGCTAGCCTAGTTCGAGCTGAGACTGAAGCCAATGCCTTTGCTTGA 4521 0.4353 MADSFSFEGDSYTSHQGRHYPTPVSYHSMSGSGSGSFIPSNSQSNATSRTTRSRHNRVPATPFASDDDHSWKEEVSWKFEATGWRDYSTNFGSVLSPWPASSPSDRSRVFRRSANDYYLSRTSRFRGLTSYEHSGYGRVELHSYVAARDNDYGYFDQHSQPHGLSKLGIIQDRSSRKGKTSPLAEEDELSMIDYSITQDHVISPNSNGHGHGLESPYFKHGHGDYVGHGLLSHDSQFYRSGGGGYSHHDIDKFSEYDEEGEEDMDEEDARPPKTVGLLSLFRYSTKLDWVLVFVGCLGALINGGSLPWYSYLFGDLVNKISEADKDKTQMMKDVEKICIFMAGLAALVVFGAYLQITCWRLVGERSAQRIRTEYLRAILRQDITFFDTDINTGDIMHGIASDVAQIQEVMGEKMAHFIHHIFTFICGYAVGFRRSWKVSLVVFSVTPLTMFCGMAYKALYGGLTAKEEASYRKAGSIAEQAISSIRTVFSFVAESKLAGKYAELLQNSAPIGAKVGFAKGIGMGVIYLITYSTWALAFWYGSILIARNELDGGSAIACFFGVNVGGRGLALALSYFAQFAQGTVAASRVFFIIERIPEIDPYSPEGRKLSVVRGRIELKSVSFAYPSRPDSLILHSLNLVLPSSKTVALVGASGGGKSTIFALIERFYDPIEGIITLDGHDLRTLQVKWLRDQIGMVGQEPILFATSILENVMMGKDNVTKEEAISACVAADAHSFISSLPLSYDTQVGDRGTKLSGGQKQRIALARAMIKDPKILLLDEPTSALDAESESAVQRAIDKISAGRTTIVIAHRIATVKNADAIVVLEHGSVTEIGDHRQLMAKAGAYYNLVKLATEAISKPQSIENGMQKANDLSIYDKSVAGLSGSRYVVDIPRPKDLIYRDEEEKQEDMGDMQDKKARKYRLSEVWKLQKPELVMLFSGLLLGMIAGAILSLFPLVLGISLGVYFGHDTHKMKRDVGHLCLVLVGLGFGCILSMTGQQGFCGWAGSKLTQRVRNLLFKSILKQEPGWFDFDENSTGVLVSRLSLDCVSFRSVLGDRFSVLLMGLSSAAVGLGVSFFFNWRLTLVVAAVTPFTLGASYISLIINIGPRVDNESYAKASNIASGAVSNIRTVTTFSAQEQIVKSFDGALSEPRRKSLRSSQLQGSIFGLFQGAMYGAYTLTLLFGAYLVEHDKAKLGDVFKIFLILVLSSFSVGQLAGLAPDTSMATTAIPAVQDIINRRPLIDNNRTKGRKVERSKPFNIEFKMVTFAYPSRPEVTVLRDFCLKVKGGSTVALVGPSGSGKSTVIWLTQRFYDPDQGKVMMNGIDMREIDVKWLRRQMALVGQEPALFAGSIRDNIAFGDPNASWAEIEEAAKEAYIHKFISGLPQGYETQVGESGVQLSGGQKQRIAIARAILKKSRVFLLDEASSALDLESEKHIQDALKNVTKEATTIIVAHRLSTIREADKIAVMRDGEVVEYGSHDTLMASIQNGLYASLVRAETEANAFA 1506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2960g00002 1506 Gene3D ABC transporter type 1, transmembrane domain 339 1227 IPR036640 GO:0005524|GO:0016020
Mupr2960g00002 1506 ProSitePatterns ABC transporters family signature. 1399 1413 IPR017871 GO:0005524|GO:0016887
Mupr2960g00002 1506 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 293 581 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr2960g00002 1506 FunFam ABC transporter B family member 1 1249 1500 - -
Mupr2960g00002 1506 MobiDBLite consensus disorder prediction 7 58 - -
Mupr2960g00002 1506 MobiDBLite consensus disorder prediction 1 68 - -
Mupr2960g00002 1506 FunFam ATP-binding cassette transporter, subfamily B, member 2, group MDR/PGP protein PpABCB2 1111 1251 - -
Mupr2960g00002 1506 Gene3D - 614 866 IPR027417 -
Mupr2960g00002 1506 FunFam ABC transporter B family member 1 606 854 - -
Mupr2960g00002 1506 Gene3D ABC transporter type 1, transmembrane domain 1228 1502 IPR036640 GO:0005524|GO:0016020
Mupr2960g00002 1506 Pfam ABC transporter 634 783 IPR003439 GO:0005524
Mupr2960g00002 1506 Pfam ABC transporter transmembrane region 939 1208 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr2960g00002 1506 Pfam ABC transporter transmembrane region 292 563 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr2960g00002 1506 Gene3D - 1249 1500 IPR027417 -
Mupr2960g00002 1506 SUPERFAMILY ABC transporter transmembrane region 920 1240 IPR036640 GO:0005524|GO:0016020
Mupr2960g00002 1506 CDD ABC_6TM_Pgp_ABCB1_D2_like 927 1242 - -
Mupr2960g00002 1506 CDD ABC_MTABC3_MDL1_MDL2 616 853 - -
Mupr2960g00002 1506 SUPERFAMILY ABC transporter transmembrane region 273 601 IPR036640 GO:0005524|GO:0016020
Mupr2960g00002 1506 CDD ABC_6TM_Pgp_ABCB1_D1_like 293 589 - -
Mupr2960g00002 1506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 607 852 IPR027417 -
Mupr2960g00002 1506 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 616 852 IPR003439 GO:0005524
Mupr2960g00002 1506 Gene3D ABC transporter type 1, transmembrane domain 245 330 IPR036640 GO:0005524|GO:0016020
Mupr2960g00002 1506 Pfam ABC transporter 1279 1426 IPR003439 GO:0005524
Mupr2960g00002 1506 CDD ABC_MTABC3_MDL1_MDL2 1260 1498 - -
Mupr2960g00002 1506 SMART AAA_5 1287 1473 IPR003593 GO:0016887
Mupr2960g00002 1506 SMART AAA_5 643 829 IPR003593 GO:0016887
Mupr2960g00002 1506 FunFam ABC transporter B family member 19 279 611 - -
Mupr2960g00002 1506 ProSitePatterns ABC transporters family signature. 755 769 IPR017871 GO:0005524|GO:0016887
Mupr2960g00002 1506 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1260 1496 IPR003439 GO:0005524
Mupr2960g00002 1506 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 940 1224 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr2960g00002 1506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1256 1497 IPR027417 -
Mupr2960g00002 1506 PANTHER ABC TRANSPORTER B FAMILY 255 852 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2960g00002 Mupr-Chr2960 9887 17372 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2960g00002 968 1506 Calmodulin-binding Proteins AT2G36910 37.338 5.07e-104 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2960g00002 K05658 - gmx:100816700 2600.85