Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2949g00002 ATGGCCCCATCACCATCATCATCACCATCACCATCTTCGAAGAAGCATCCACTGTATCACGGAATCAGGTGCCGCGGAAGGAAATGGGTCTCCGAAATCCGCGAGCCACGCAAGGCGTCCCGCATATGGCTCGGAACGTTCCCGACGCCGGAGATGGCCGCCGCCGCCTATGACGTGGCAGCGTTGGCCTTGAAAGGCGACGGTGCCGTTCTGAACCTTCCTCAGTCGGCTTCCAAGTATCAAATCCCCGCAACGAACTCTCCTGCGGATATCCGCACTGCTGCTTCTGCTGCAGCCGCGATGATAAAGGCCGAAAGTGAAGCTACTCACAGTGGATCAATAACTGAAGCTGCATCAACTTCGTGGTTCGAAACTGATTTTGTGGACGAGGAAGCCATATTCGGCATGCCAAGTTTGCTGGTGGACATGGCCGGGGGGATGCTTCTGTCACCGCCCAGAATGACACCACCACCGTCCGATAACTCGCCTGAGAAGCAAGCTTGCTAA 507 0.5602 MAPSPSSSPSPSSKKHPLYHGIRCRGRKWVSEIREPRKASRIWLGTFPTPEMAAAAYDVAALALKGDGAVLNLPQSASKYQIPATNSPADIRTAASAAAAMIKAESEATHSGSITEAASTSWFETDFVDEEAIFGMPSLLVDMAGGMLLSPPRMTPPPSDNSPEKQAC 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2949g00002 168 Gene3D AP2/ERF domain 18 75 IPR036955 GO:0003700|GO:0006355
Mupr2949g00002 168 ProSiteProfiles AP2/ERF domain profile. 18 74 IPR001471 GO:0003700|GO:0006355
Mupr2949g00002 168 SUPERFAMILY DNA-binding domain 18 76 IPR016177 GO:0003677
Mupr2949g00002 168 Pfam AP2 domain 18 66 IPR001471 GO:0003700|GO:0006355
Mupr2949g00002 168 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 6 143 - -
Mupr2949g00002 168 SMART rav1_2 18 80 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2949g00002 Mupr-Chr2949 21564 22291 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2949g00002 13 166 AP2-EREBP Transcription Factor Family AT5G52020 54.545 4.47e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr2949g00002 AP2 5.9e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2949g00002 - - gmx:100811020 261.536