Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2949g00001 ATGGCTTCCGGTTCTAGTAAACCTCTGAGTTATGAAATGGTAGCAGCGAACCGTCCCAATAGTTGCACTCTCTTGTTGCTTAAGGATTATCTAAGGGACGACCTAAGTTCGTGTTCATCCAACGGTTTCAGATCACTCCCCCGCCGACAATGTTGTCTGCGACCTCGTTCTTCTGCAAAATCGGTTCTGCAGAAAGCTTTAGAAGCAGTGTTCAACGCCGTCAAATCCCGAAGGTGTAGAGCCAAGAAAGCTGGTGTCGGTGTTCTTTCTAGAAGCTTTCATCGGAGGCTGCTAAACAGAAGGTTCTGGAAAAGAGCAAGCAAGGGAACTAACAGCTGGCCACACTCCGTTTTCACTTGTTCGTTAACCGACGCTGATATGGAAGGATCAGTAGCAACTACAACCAACACGTGCTCCATCACCAATTCCGCAAGGGAACATTATGGATTGCAGGTTGACTCTCGTAGAAAACAGGATTGGCCGACTGAGAAGGGACAATTTAGTCCTGTATCGATATTAGATTGTCCATTATTTGATGATGATGAAGAAATTACGTCTCCTTTCAATTCTCCGTTATGTTCCACCCCGGAAGGAGTGAAACACAAGCATATCCAGAAGAGTCGACATTATAATCGCGTGGGTTCAGTGAAGCCGGTTGACTTAGAGAAAAAGATGACATGGTCAGAAAAGCAGGAAGATGAAGCAATATATAACGATCCCACAAAACCTTGTCCAGTGTTAGAATCGATTACGAGTACACGAAACGGGAACAGTAACTTGTTTCGTGATAACGTAGAAAAGAATGCGCTCGACCTCCTCACCCGTGTTAAAAAATCAATTCCATGTGTTTGTTTGAGAACTGAGGCAGAGAAGTTGGTATTTGATTTCTTGAAGGAGAGTATTTGGGAGAATATTAATATTGGAAATTCCATGAAGCAGCAGCTTTGCAAGGTGGCAGAGGATTGGATACGGGGGCAAACCCATGAACAATATTTGAATTTGCAAACAGGGAAGGGAAGAGAGATATACGTTGAGGAGATGAACAAGTGGGGGAGTTGGAGAACTTTTGGTGAAGAAATACAACGCCTGGCCTTGGAACTCGAACTTGAGTTCTCCACAAGTTTGGTCAACGAGCTCGTTGTTGACTTCACCACGTGCTGTTTTTGA 1167 0.4439 MASGSSKPLSYEMVAANRPNSCTLLLLKDYLRDDLSSCSSNGFRSLPRRQCCLRPRSSAKSVLQKALEAVFNAVKSRRCRAKKAGVGVLSRSFHRRLLNRRFWKRASKGTNSWPHSVFTCSLTDADMEGSVATTTNTCSITNSAREHYGLQVDSRRKQDWPTEKGQFSPVSILDCPLFDDDEEITSPFNSPLCSTPEGVKHKHIQKSRHYNRVGSVKPVDLEKKMTWSEKQEDEAIYNDPTKPCPVLESITSTRNGNSNLFRDNVEKNALDLLTRVKKSIPCVCLRTEAEKLVFDFLKESIWENINIGNSMKQQLCKVAEDWIRGQTHEQYLNLQTGKGREIYVEEMNKWGSWRTFGEEIQRLALELELEFSTSLVNELVVDFTTCCF 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2949g00001 388 PANTHER OS04G0572500 PROTEIN 25 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2949g00001 Mupr-Chr2949 2426 4462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2949g00001 156 384 TRM (TON1 Recruiting Motif) Superfamily AT4G11780 28.755 2.01e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2949g00001 - - gmx:102659854 491.886