Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2938g00003 ATGCTCCAAGGATTCACCCAAGTTAAATTCAAATTGAGTTACCAGGAGCACTGCCACTTGACTGAATTGTTTTCCAGTACTAGCAATTTCTCACTTGCTTTGGATAAACTTCGAAAGCATCGAGGATATTTTCAACTCATTGTTACGGAAGTTCATACACCAGATCTTGATGGATTCAAACTAAAACAAATCGTTGATGAAGAATTTGCAATACCAATTATAATGATTTCAGCTGACAATAGTGAAGAAATCCAGCAAAAAGCTATAACGTCGGGTGTAATGCGTTATATCTTTAAACCAGCAAAACCAGATGACTTTGTAGTAGCTGTAATGAAAGGTGAGAAACAAAAATGGGAAGAGTTTCATGATCTCACCGTTAGTATCTCATACAATAGTAATGTGACTGCAGAGGATTCATTTTCCACCAGAATAGTTGGAGATATTATTGAAGAAACAAGTGGTGGGAGCAAGCATCACAAAGAAGCGAGTTGTTCATCATTTATAGAAGAAGAAAGTAGGGATGAACAAAAGAGTGATGATATAGAGCCTTCATCGATGGATACTTCAAAAGATAATGGATCTACTGCCCCTAAGAAGACCAAAATGATTTGGACAAAAGAACTTCAAAATAAATTCGTGAAAGCCATAGATATTATTGGCAAAGAGAATGCAATTCCAAAAAAAATTCTCAAAGTCATGAATGTTGAAGGGTTAACTAGGGAAAATGTCGCAAGTCATTTGCAGAAATATAGGCTTTACTTAAGGCGAGTTGAAAGAATATTAGTTTCAGTTATAAAGAAAGCAAATGAAGACAATGATGTCTTTTTGTCTAAGATAGCATCAGCACACTCGTCATTGGTGTTGAAACTCATTCAAGAAGATTTGGAGAAAAATGTGAAGCAGAATAAAAGGAGAAGTTTAGAATATTTAGAATCCAACAACATATATATATCTCACTTAAGATCCAAACTATCTAGCTGGTTGTTGAGTAACCCTGAGCACTATTGCTCTTTCAAAATGAATCCTTATGTTAAAATGAGTCTTCCATCAGACAAAACCAATAACCTTGGTATCACAAATAATACAACAAAACCATACCACCCATATCTTAATGTTAATAATGTAGATCAACCAAGAAGTGCTTCAAATTTAGTGCAAAATATTTACAACGAGTCATCTCAAAATACCCTAATTAGACCTTCTGAATTAGGTTGTTACAATTTTAACAAACATGGATTGGGTCAAGTATCAAATTCAAATGTTGTTAATTGCAATGCTGTAACATCTTTCCAAGGAAGGTGCAGGTCAAGCCAAATTCAGCTAAATGAAAAATGGGTTCCAAATCCTTTTGACCTTAGGTATGCCATTGTGAATGATAGAAACACTAATAATGTGGCTTCTGTAGGGATGTGGAAACCAAATTCTACTAGTTTGGTTGGGGGAGTAGTGTCTACTACTGGTGGGGTTTATAGCACAAACCAAAATTTGCCAATATCAATGGGGGGAACTAATATTTTTGGAAATATTGTCATGGGAGGAAACTTAATTCAACCCCAACAACAACACCAAACTTATAATCAAGAGTACAATCAAACTTTTGCAACCGTGGATAACAATTTTGCTTCTCAAGTAACATCTAATGGATCCCATTTCAAAGGAATTGATCATGCTTTTTCAATGGAAGAATATATTCTTAATAAAGTCCCCATGCAGGATAAAAACAAAAGCGATGACTTAGGAAAAGAATCTATTCCTTCAAATTGTACCATGCATGTTAATACAGCAAAAGCCAAAGCTTTTATGCAGGCAAGAAGAATTTACTGA 1824 0.3481 MLQGFTQVKFKLSYQEHCHLTELFSSTSNFSLALDKLRKHRGYFQLIVTEVHTPDLDGFKLKQIVDEEFAIPIIMISADNSEEIQQKAITSGVMRYIFKPAKPDDFVVAVMKGEKQKWEEFHDLTVSISYNSNVTAEDSFSTRIVGDIIEETSGGSKHHKEASCSSFIEEESRDEQKSDDIEPSSMDTSKDNGSTAPKKTKMIWTKELQNKFVKAIDIIGKENAIPKKILKVMNVEGLTRENVASHLQKYRLYLRRVERILVSVIKKANEDNDVFLSKIASAHSSLVLKLIQEDLEKNVKQNKRRSLEYLESNNIYISHLRSKLSSWLLSNPEHYCSFKMNPYVKMSLPSDKTNNLGITNNTTKPYHPYLNVNNVDQPRSASNLVQNIYNESSQNTLIRPSELGCYNFNKHGLGQVSNSNVVNCNAVTSFQGRCRSSQIQLNEKWVPNPFDLRYAIVNDRNTNNVASVGMWKPNSTSLVGGVVSTTGGVYSTNQNLPISMGGTNIFGNIVMGGNLIQPQQQHQTYNQEYNQTFATVDNNFASQVTSNGSHFKGIDHAFSMEEYILNKVPMQDKNKSDDLGKESIPSNCTMHVNTAKAKAFMQARRIY 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2938g00003 607 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 196 255 IPR017930 -
Mupr2938g00003 607 FunFam Two-component response regulator 195 258 - -
Mupr2938g00003 607 Pfam Myb-like DNA-binding domain 203 251 IPR001005 -
Mupr2938g00003 607 MobiDBLite consensus disorder prediction 154 198 - -
Mupr2938g00003 607 Gene3D - 195 258 - -
Mupr2938g00003 607 SUPERFAMILY Homeodomain-like 196 256 IPR009057 -
Mupr2938g00003 607 Pfam Response regulator receiver domain 26 110 IPR001789 GO:0000160
Mupr2938g00003 607 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 158 549 IPR044841 GO:0003700|GO:0006355
Mupr2938g00003 607 MobiDBLite consensus disorder prediction 154 186 - -
Mupr2938g00003 607 SUPERFAMILY CheY-like 27 115 IPR011006 -
Mupr2938g00003 607 NCBIfam myb-like DNA-binding domain, SHAQKYF class 199 252 IPR006447 GO:0003677
Mupr2938g00003 607 Gene3D - 13 130 - -
Mupr2938g00003 607 ProSiteProfiles Response regulatory domain profile. 1 114 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2938g00003 Mupr-Chr2938 4621 8455 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2938g00003 32 257 Response Regulator Gene Family AT3G16857 34.553 3.41e-37 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mupr2938g00003 Response_reg 4.7e-11 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2938g00003 - K14491 aprc:113850659 445.277