Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2937g00001 ATGTCGAGCTCGTCGGAGTACTCTGAGTTTTCCGGCCACAAACCGGCCAAGTCGCCGGAGAAGTCGAGTTTCTCTCAGACTTGTAGTCTATTGAGTCAATACATCAAGGAGAAGGGTAGCTTTGGAGATCTTACCCTCGGGATGACATGCAACACTGAACCATGTGGGTCACCTGAGACATCTTGTCAATCTGCGACAACCATGAACTTGTTTCCTACCAAGGAAAACAACGTGACACCAAAGAACCTGACAGCTATGGATTTGCTCTCTCCACAAGCTTCCTTTCGTCCTGCAGAGGAGATTCCAACCTTGGTTAATTCCAGTGCAATTAAGGGGGCTAAAGCTGCACAGATGACAATCTTTTACAATGGACAAGTTGTTGTGTTTGATGATTTTCCTGCTGACAAAGCAAGTGAAATCATGTCCTATGCCAGCAAAGGGATCCCTCAAAATCAGAACAGTTCTGTTTACACCTACACACAGAGCCAGCCTTCATTTCCTCCTACTTTGATCAGAACTTCTGCTGATTCAAGTGCTCCAATTATTCCCACTGTCAATATTGTTGGCACCAACTCCATTCATGAACACCCTCAAGCTTCATCCAGACCTGTTGTTTGTGATCTTCCAATTGCTAGAAAAGCTTCACTCCACCGGTTTCTGGAGAAAAGAAAGGATAGAATTGCTGCTAAAGCACCATATCAAGTAACAAATGGGCCATCTAACAAGCCAGCCGAGCCCATGTCATGGCTAGGGTTGAGTGCTACTTCACCTCAAATCTGA 780 0.4538 MSSSSEYSEFSGHKPAKSPEKSSFSQTCSLLSQYIKEKGSFGDLTLGMTCNTEPCGSPETSCQSATTMNLFPTKENNVTPKNLTAMDLLSPQASFRPAEEIPTLVNSSAIKGAKAAQMTIFYNGQVVVFDDFPADKASEIMSYASKGIPQNQNSSVYTYTQSQPSFPPTLIRTSADSSAPIIPTVNIVGTNSIHEHPQASSRPVVCDLPIARKASLHRFLEKRKDRIAAKAPYQVTNGPSNKPAEPMSWLGLSATSPQI 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2937g00001 259 Pfam tify domain 114 145 IPR010399 -
Mupr2937g00001 259 SMART tify_2 111 146 IPR010399 -
Mupr2937g00001 259 MobiDBLite consensus disorder prediction 234 259 - -
Mupr2937g00001 259 MobiDBLite consensus disorder prediction 1 23 - -
Mupr2937g00001 259 ProSiteProfiles Tify domain profile. 111 146 IPR010399 -
Mupr2937g00001 259 Pfam Jas motif 209 234 IPR018467 -
Mupr2937g00001 259 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 240 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2937g00001 Mupr-Chr2937 16531 18911 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2937g00001 1 254 Tify Gene Family AT1G19180 42.379 1.35e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mupr2937g00001 tify 6.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2937g00001 K13464 - gmx:100812618 424.091