Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2936g00010 ATGTATCATTCAAAGAATGTTCCTAGTGCAAGTTTAGTTGGAGGTAATTCATCAATGCATGGTCAGCACATGGATTGTGGTGGCAGCACAATGGATCCTGGCAGTGGAGGAAACAGTCTTAGCAACAACTCTAATCTCACCTCAAAACAACGCTTAAGGTGGACACATGAATTACATGAGCGCTTTGTTGATGCCGTGGCTCAACTTGGTGGGCCAGATCGTGCCACACCCAAAGGCGTCCTCAGAGTTATGGGTGTACAAGGCTTGACCATTTACCATGTCAAAAGCCATTTACAGAAATACCGCCTAGCAAAATATTTACCTGACTCCTCATCTGATGAAGGGAAGAAGGCTGACAAGAAAGAAACAGGGGATATGCTTTCCAATCTTGATGGTTCATCTGGGATGCAAATTACTGAAGCACTTAAGCTTCAAATGGAGGTGCAGAAGCGACTACATGAACAATTGGAGGTGCAGAGACAGCTACAATTGCGGATAGAAGCTCAGGGTAAATACCTGAAAAAGATAATTGAAGAACAACAGCGGCTCAGTGGTGTTCTTTCCGAGGCACCTGATTCTGGGATTCCAGGGGATACGTGCCAAGAGCCGGATAACAAGACTGACCCATCAACCCCTGATCCTGAGAAGGCTGCCAAAGACCGTGCCCCGGCTAAGAGTCTTTCCATCGAATCTTTTTCATCTCACCATGAACCAACGACACCAGATTCAGGCTGCCATGCTGGTTCCCCTGCTGACAGCCCTGAAGGAGAGAGATCAATGAAGAAGCAACGAGTAAGCATGGATGGAGCATATTCTAAACCAGACATTGTGCTTCCACATCAGATACTGGAGTCAAGCATGTCATCATACCAGCAATCTAACACTGTTTTCCTTGGCCAAGAGCAATTTGAACCTTCTTTGGTTATATCTACTATAAGTGGTGAGGAATTGGAGAAGATGAAGGAACCTGGTCTTCTTAGATTCCCA 987 0.4569 MYHSKNVPSASLVGGNSSMHGQHMDCGGSTMDPGSGGNSLSNNSNLTSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDEGKKADKKETGDMLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSEAPDSGIPGDTCQEPDNKTDPSTPDPEKAAKDRAPAKSLSIESFSSHHEPTTPDSGCHAGSPADSPEGERSMKKQRVSMDGAYSKPDIVLPHQILESSMSSYQQSNTVFLGQEQFEPSLVISTISGEELEKMKEPGLLRFP 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2936g00010 329 MobiDBLite consensus disorder prediction 208 223 - -
Mupr2936g00010 329 Gene3D - 48 107 - -
Mupr2936g00010 329 MobiDBLite consensus disorder prediction 108 126 - -
Mupr2936g00010 329 NCBIfam myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Mupr2936g00010 329 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Mupr2936g00010 329 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 29 312 IPR044848 GO:0003700
Mupr2936g00010 329 Pfam MYB-CC type transfactor, LHEQLE motif 136 182 IPR025756 -
Mupr2936g00010 329 MobiDBLite consensus disorder prediction 108 133 - -
Mupr2936g00010 329 MobiDBLite consensus disorder prediction 1 24 - -
Mupr2936g00010 329 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Mupr2936g00010 329 Coils Coil 139 159 - -
Mupr2936g00010 329 FunFam Myb family transcription factor 48 106 - -
Mupr2936g00010 329 MobiDBLite consensus disorder prediction 185 273 - -
Mupr2936g00010 329 MobiDBLite consensus disorder prediction 1 45 - -
Mupr2936g00010 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 48 106 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2936g00010 Mupr-Chr2936 52036 56031 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2936g00010 84 297 G2-like Transcription Factor Family AT2G01060 68.610 8.26e-90 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr2936g00010 Myb_DNA-binding 2.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2936g00010 - - gmx:100786925 564.303