Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2929g00001 ATGGAGGACCTCCCCGATCCCCACTCTTCGCCGCTTCCCAATGGTGACTCCGACCAGCGCTGCGCCAAGAAGCCCAGAGTCATCGACGACGCCCAATTGAAGAGAGTGGCGGAGATTGTGCTCGTTCTCTCCACGATGGCAACGGTGCGGGCCGGAAGGAAACCCTCCGACGCCGAGGTCGAACTCATGCGAGAGGCTCGCGCCAAGCTCGCCTGCCTCTGCGAGGGTTTGGCTCCCAAGGACATCGTTGCCACGGAAGCTATTGGAACCGTCATTGAGGATCTCGGCTTGCACTCCAAGCTTAAGGACCAGAGGCTAGGGTTTCGAACTCCCAAAATGTCCATTGCCGAGAGGTATTCCCATGCTAAGTGGAAGATGGAGGAAGCAAAGAAATTTTCTGCTCCTGCACCTTCAACACTTTCTACACCTTCTACAACACATACATCTCAGCCCTTACAAACAAACATTGGTGGATCAGTTGACAATCGTGTGCCATCACATGTTGTTCGAATTTTTCCTTCTGATAAATCAAACCATCCAGCAATTTCTTCTATGGGTACCGTAGTGTCTATTCCTCCTGCCCATGTTTCTGCAGGATCTTCTGCATCATTGCAATACCAATTGACTGGCAATGAAGTGAGACCACCAGTGGTTTCTGGTGTGATGCCTAGCAGTCATTTGGGGAGAAATTCATCTTCCTTAGCATTGCCTAAAGTTGAACATCCGCAGTTCAAAGTTGATGGAGGATCAAATGGGTCTTCTTATATGCTGCAAGTCCAAGCAAATTCGTCAGCAAACCAACCTTTGGTGAATGCTCCAACATGGTCTATACAGACTCAAGCTACTTCATTAGCTAGAAGTGCATCAGAAAACAAGGTGCCTGCTCATAACTCTGTCAAGGTTGAAGGAATACCTGACATAACTGTATCAAGGGCAGGGCCACAAATAACAACAGACCAGAGCTTTAGACCATTTATCACTCAAACAGCCCCTGGAAATTTGCCTAGCGTGCACCAGCCATTGCAGGCAACAAACATTGTTCAGCCTCCTTTGATTCCTAGTCACACTGATATTGCAAAGGTTGTCCAGAAAGTGTTACAACCAAAGCTTCCAGTCCATCCCACATGGACTCCTCCCTCAAGGGATTATATGAATAAGGCTTTGACATGTCAGATGTGTGAGCTCAGTGTCAATGAGGTTGATACTGTACTTATTTGTGATGCTTGTGAAAAGGGATTTCACTTGAAGTGCCTGCAGCCATCAGTCTTGAGAGGAATTCATAATAGAGTTGATTGGCACTGTATGAGGTGCTTGAGTCTAAGTGGTGGAAAGCCTCTGCCTCCAAAATATGGTCGTGTCATGAGATCCTCAAACACACCACCAAAATTGCCCTCTAGTACAGGCGGTATTCAACCATGTTCTGAGAAGAAAGCAGAGAACATAGATCCAAAGATCATCCTGCAGATGTTAACAGCAAATGGAAACTCTGTTCCAACTGTTTCCAGTGGCAATCACAATGTTGAACTTCCATCTGACTCAAAGATCCAAGATACCAAAGATATGCAAGGGATTGACATTTCATCCAGCATTGAAGCTATCGATAAGAAGCCTGATCCAAACAACTCTATGAAATCTCTTAGTGCAGCTTCTAGTCCTTCCACTGGCTTGCTAGGTGAAAGTTCTGCTCAACAAATAAATTCTAAGGTTTTGACTGGTAAAGAGACTTCAGAATCTCAGTCTCTTCCTAAATTATCCGAGCTGGCTAAATGTGAAAATTTGCAATCATCACAAGATTTTCAAGTTGAACAGATAATGTCACAAGACAATGCTGAAGTATCATCAGATAAACATGTTGGCAGTAATATTATGAATACTAAACAGGAGTTTCATGGAGGAGAAAATTTAACTTACGATATCAAGCGTGATGACCAAGATGCTGCACTTGCAAATTTTGTTGGAACTTCTGGAACTAATACTGAAGGCAGACAGCATTCTGCATTATCTTATGATAGCTCACATGTTGTAGAATGGATTGGTGATGTAGTACAACTTGTAGATGAGAAAAAGTTTTACCAATCTTGTTGTGTTGATGGAGTAACATATAGGCTGCAGGGTCATGCTTTTTTCCCCACCAGCAATGGCAAACTAACTCCTTCTAAACTCCAGGCAAGCAAATCATCATGCTTTCCACTATATAGGTTTGAATACAAAAAATCTATGTGGGAAGATTGCCAAACTGGGTTAAAGTGGGTTAAGGTGACAAAGTGCTACTTTCCTGATGATTTGCCAGGGAATATTGGTCATCCATGTATATCTGAAGTCAATGAGGTTTATGAATCTAATAGTGATAGAACTGAAATGGTTAGCTCTATTCGAGGCCCATGCGAAGTCCTCCCATCTGATAAATTTAAACAAGAAAATGACAGGCGATGTCTGTTAGGAGTTGAGGAAAGTTCTAGAGTGCCGCCCATTTTCCTTTGCAGGTGGTTTTATGATGAATTCAAAAAGTTATTTCAACCTGTAACCAGTTGA 2532 0.4356 MEDLPDPHSSPLPNGDSDQRCAKKPRVIDDAQLKRVAEIVLVLSTMATVRAGRKPSDAEVELMREARAKLACLCEGLAPKDIVATEAIGTVIEDLGLHSKLKDQRLGFRTPKMSIAERYSHAKWKMEEAKKFSAPAPSTLSTPSTTHTSQPLQTNIGGSVDNRVPSHVVRIFPSDKSNHPAISSMGTVVSIPPAHVSAGSSASLQYQLTGNEVRPPVVSGVMPSSHLGRNSSSLALPKVEHPQFKVDGGSNGSSYMLQVQANSSANQPLVNAPTWSIQTQATSLARSASENKVPAHNSVKVEGIPDITVSRAGPQITTDQSFRPFITQTAPGNLPSVHQPLQATNIVQPPLIPSHTDIAKVVQKVLQPKLPVHPTWTPPSRDYMNKALTCQMCELSVNEVDTVLICDACEKGFHLKCLQPSVLRGIHNRVDWHCMRCLSLSGGKPLPPKYGRVMRSSNTPPKLPSSTGGIQPCSEKKAENIDPKIILQMLTANGNSVPTVSSGNHNVELPSDSKIQDTKDMQGIDISSSIEAIDKKPDPNNSMKSLSAASSPSTGLLGESSAQQINSKVLTGKETSESQSLPKLSELAKCENLQSSQDFQVEQIMSQDNAEVSSDKHVGSNIMNTKQEFHGGENLTYDIKRDDQDAALANFVGTSGTNTEGRQHSALSYDSSHVVEWIGDVVQLVDEKKFYQSCCVDGVTYRLQGHAFFPTSNGKLTPSKLQASKSSCFPLYRFEYKKSMWEDCQTGLKWVKVTKCYFPDDLPGNIGHPCISEVNEVYESNSDRTEMVSSIRGPCEVLPSDKFKQENDRRCLLGVEESSRVPPIFLCRWFYDEFKKLFQPVTS 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2929g00001 843 CDD BAH 738 842 - -
Mupr2929g00001 843 MobiDBLite consensus disorder prediction 134 160 - -
Mupr2929g00001 843 MobiDBLite consensus disorder prediction 135 160 - -
Mupr2929g00001 843 MobiDBLite consensus disorder prediction 540 562 - -
Mupr2929g00001 843 MobiDBLite consensus disorder prediction 458 473 - -
Mupr2929g00001 843 SUPERFAMILY FYVE/PHD zinc finger 380 445 IPR011011 -
Mupr2929g00001 843 MobiDBLite consensus disorder prediction 496 562 - -
Mupr2929g00001 843 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 17 842 - -
Mupr2929g00001 843 MobiDBLite consensus disorder prediction 1 21 - -
Mupr2929g00001 843 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 379 451 IPR013083 -
Mupr2929g00001 843 SMART PHD_3 389 438 IPR001965 -
Mupr2929g00001 843 MobiDBLite consensus disorder prediction 496 511 - -
Mupr2929g00001 843 Pfam PHD-finger 390 438 IPR019787 -
Mupr2929g00001 843 Gene3D - 673 843 IPR043151 -
Mupr2929g00001 843 MobiDBLite consensus disorder prediction 455 475 - -
Mupr2929g00001 843 ProSitePatterns Zinc finger PHD-type signature. 390 437 IPR019786 -
Mupr2929g00001 843 ProSiteProfiles Zinc finger PHD-type profile. 387 440 IPR019787 -
Mupr2929g00001 843 ProSiteProfiles BAH domain profile. 712 842 IPR001025 GO:0003682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mupr2929g00001 PHD 3.2e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2929g00001 - - gmx:100807139 1429.85