Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2906g00003 ATGAAGTTTATTCTTTTTCCTATGAGTATCATAGTTTATATGCTGTTTCTCCCTTCTCTCATAGTTTTCATAGCAGCGGACACATCATCCATTAATCAGTCCCAGCCCCTGAGTCATGGAAAGACCATAGTTTCTACCCCACGAGGAATCTTCGAGCTTGGTTTCTTTAATCTAGGAAATCCGAACAAAATCTACCTCGGGATTTGGTACAAGAATATTTCAGTTCAAAACGTTGTTTGGGTTGCAAACAGCGGCAACCCAATCAATGATTCCTCTGCCATATTGAAACTAAACAGTTCTGGCAATTTGGTCCTAACACACAACAACACGGTTGTTTGGTCCACAAGTTCTACAAAAGAAGCACAGAACCCAATGGCAGAGCTCTTGGATTCTGGCAACCTTGTGATAAGAGATGAGAATGCAACAAAGTCAAATCCAGAGGCGTATCTGTGGCAAAGCTTTGACTACCCATCTAATACATTGCTGCCAAGTATGAAGATTGGATGGGAGCTCAAAAGAAATCTCAACCGTCAACTGATAGCATGGAAGAGTAGTGATGATACAACCCCAGGAAACTTATCTTGGGGTATGGTTCTTCACCCCCTTCCTGAGATCTATATGATGAAGGGAACCACAAAGTACTACAGACTTGGACCATGGAACGGTTTGCGTTTCAGTGGCGTGCCAGAAATGACGCCTAATCCCATTTATCTTTACCAGTTTGTCTCCAACAAGGAAGAGGTTTATTATACATGGACCCTCCAGCAGTCTAGTTTGATAACAAGAGTTGTACTTAACCAAACCACACTACAACTCCTTCAATATGTATGGTCAGATATTGATGCATCGTGGATGCTATATTCAACGTTGCCAGAAGACGACTGCGACCATTATGGCGTGTGTGGAGCCAATGCATATTGCATCACTTCTGCTTCACAGATGTGTGAATGTTTACAAGGGTTCAATCCCGCGTCTCCTGAAAAATGGAACTCCTTTGACTGGTCCCAAGGATGTGTCCTGAAAAATCCACTAAGCTGCAAAGATAACTACACGGATGAGTTTGTCAAATATGAGGGCATGAAAGTACCAGATACTACACATACTTGGTTGGATGAGAATATTGATTTAGATGAATGCAAAGTCAGATGCTTGAATAATTGCTCTTGCACGGCCTATACTAATTCGGACATAAGAGGAGCAGGGAGTGGTTGTGTCATTTGGTTTCAGGAATTGTTTGACATCAAAATGCTTCAAACCGGAGGACAAGATCTATATATCCGTATACCTGCTTCGGAGTTAGAGCAACATGGGGACAGGAAAAGTGTGACGATAATAATTGCTACCACAATTGCTGCAATTGGTGCGGTGATACTTTTATTTTGTATGTTTGTCATATACAGAGTCAGAAGGAACATTGCTGAAAAGTCAAACGTAAAAGTAAACATCGAAAGACAGATAGAAGAGCTGGACCTACCATTGTTTGATCTGCTAACAATCATTACTGCCACTAAGGATTTCTCATTGAATAATAAGATCGGACAAGGGGGTTTTGGATCTGTATATAAGGGAAAATTAGCGGATGGGCGAGAAATCGCTGTGAAGAGACTTTCAAGCAGTTCTGAACAAGGAACAACTGAATTCATAACAGAAGTAAAACTGATTGCAAAGCTTCAACACCGAAATCTTGTAAAGCTTCTTGGCTGTTGCATTGAAGGACAAGAAAAATTACTTGTATATGAATACATGGTTAATGGCAGCCTAGATTCCTTCATTTTTGATTGGCCACAGCGCTTTCACATAATATTTGGAATTGCTCGAGGACTTCTATATCTTCATCAAGATTCTCGGTTAAGGATAATTCATAGAGATCTCAAAGCAAGTAACGTTTTACTCGATGAGAAGTTAAATCCAAAAATATCAGATTTTGGAATGGCCAGAGCTTTTGGAGGAGACCAAACTGAAGGAAACACAAAAAGAGTAGTTGGGACTTTTGGATACATGGCTCCAGAATATGCTTTTGATGGGCTATTTTCAATCAAATCGGACGTTTTCAGCTTTGGTATTTTATTGTTAGAGATTATATGTGGGAGCAAAAATAAAGCTCTTTGGCATGGAAACCAAACTCTTAACCTTGTTGGTTATGCATGGACACTTTGGAAAGAGGATAATGCTTTACGGTTGATTGACTCGAGCATAAAGGACTCATGCGTCATCCCAGAAGTATTGCGATGCATCCATGTTAGTCTCTTGTGTGTGCAACAACACCCGGAGGATAGGCCAACCATGACCACTGTAATTCAAATGTTAGGGAGTGAGATGGAACTGTTTGAGCCAAAAGAGCCTGGTTTCTTTCCAAGGAGGATTTCAGATGAAGGAAATTCAAGCACAAGTCAAAACCTAATGGCTTCAAATGATGAATTAACCATTACCACATTAAATGGCCGCTGA 2448 0.4056 MKFILFPMSIIVYMLFLPSLIVFIAADTSSINQSQPLSHGKTIVSTPRGIFELGFFNLGNPNKIYLGIWYKNISVQNVVWVANSGNPINDSSAILKLNSSGNLVLTHNNTVVWSTSSTKEAQNPMAELLDSGNLVIRDENATKSNPEAYLWQSFDYPSNTLLPSMKIGWELKRNLNRQLIAWKSSDDTTPGNLSWGMVLHPLPEIYMMKGTTKYYRLGPWNGLRFSGVPEMTPNPIYLYQFVSNKEEVYYTWTLQQSSLITRVVLNQTTLQLLQYVWSDIDASWMLYSTLPEDDCDHYGVCGANAYCITSASQMCECLQGFNPASPEKWNSFDWSQGCVLKNPLSCKDNYTDEFVKYEGMKVPDTTHTWLDENIDLDECKVRCLNNCSCTAYTNSDIRGAGSGCVIWFQELFDIKMLQTGGQDLYIRIPASELEQHGDRKSVTIIIATTIAAIGAVILLFCMFVIYRVRRNIAEKSNVKVNIERQIEELDLPLFDLLTIITATKDFSLNNKIGQGGFGSVYKGKLADGREIAVKRLSSSSEQGTTEFITEVKLIAKLQHRNLVKLLGCCIEGQEKLLVYEYMVNGSLDSFIFDWPQRFHIIFGIARGLLYLHQDSRLRIIHRDLKASNVLLDEKLNPKISDFGMARAFGGDQTEGNTKRVVGTFGYMAPEYAFDGLFSIKSDVFSFGILLLEIICGSKNKALWHGNQTLNLVGYAWTLWKEDNALRLIDSSIKDSCVIPEVLRCIHVSLLCVQQHPEDRPTMTTVIQMLGSEMELFEPKEPGFFPRRISDEGNSSTSQNLMASNDELTITTLNGR 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2906g00003 815 Gene3D Phosphorylase Kinase; domain 1 466 581 - -
Mupr2906g00003 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Mupr2906g00003 815 Pfam PAN-like domain 346 414 IPR003609 -
Mupr2906g00003 815 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 154 - -
Mupr2906g00003 815 PIRSF SRK 1 815 IPR024171 GO:0004674
Mupr2906g00003 815 CDD B_lectin 34 157 IPR001480 -
Mupr2906g00003 815 CDD STKc_IRAK 512 769 - -
Mupr2906g00003 815 Gene3D Hepatocyte Growth Factor 347 426 - -
Mupr2906g00003 815 SMART serkin_6 506 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2906g00003 815 CDD PAN_AP_plant 343 429 - -
Mupr2906g00003 815 SUPERFAMILY Protein kinase-like (PK-like) 489 769 IPR011009 -
Mupr2906g00003 815 ProSiteProfiles Protein kinase domain profile. 506 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2906g00003 815 ProSitePatterns Protein kinases ATP-binding region signature. 512 534 IPR017441 GO:0005524
Mupr2906g00003 815 Gene3D - 21 154 IPR036426 -
Mupr2906g00003 815 ProSiteProfiles Bulb-type lectin domain profile. 28 149 IPR001480 -
Mupr2906g00003 815 Pfam D-mannose binding lectin 78 183 IPR001480 -
Mupr2906g00003 815 Pfam S-locus glycoprotein domain 215 324 IPR000858 GO:0048544
Mupr2906g00003 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 187 IPR036426 -
Mupr2906g00003 815 Pfam Protein tyrosine and serine/threonine kinase 507 769 IPR001245 GO:0004672|GO:0006468
Mupr2906g00003 815 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 777 - -
Mupr2906g00003 815 ProSiteProfiles PAN/Apple domain profile. 346 429 IPR003609 -
Mupr2906g00003 815 SMART blect_4 34 157 IPR001480 -
Mupr2906g00003 815 Gene3D Transferase(Phosphotransferase) domain 1 582 778 - -
Mupr2906g00003 815 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 760 - -
Mupr2906g00003 815 FunFam receptor-like serine/threonine-protein kinase SD1-8 478 581 - -
Mupr2906g00003 815 SMART ntp_6 349 428 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2906g00003 Mupr-Chr2906 20534 23839 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2906g00003 457 815 Receptor kinase-like Gene Family AT4G23150 52.011 5.46e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr2906g00003 PK_Tyr_Ser-Thr 5.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2906g00003 - - gmx:100808227 1212.98