Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2884g00001 ATGTGGGATCTCAATGACTCACCCGATCAGAGGAAGAAGGACGAGGAATCCGAAGGGTGTTCTTCCCTCAAAACTTCCATCGACGGGGATGACGAAAACAACAAAGGCAAAAGGGTTGGATCTGTTTCCAATTCGAGCTCTTCCGCGGTGGTCATCGAGGACGGATCAGAGGAAGAGGAGGAAGACGAGGAGGAGGAAGAAGAACAAGGTGGCAGAAGAAGCATGAAGAAACGAAGCAGTAGGATTTTCGGGTTCTCTGTCACCCAAGATGAAGAGTCCATGGACAGTGACCTCCCACCTGTGACAAGACAGTTTTTTCCGGTGGAGGAGGCTGACGTGGCGGTTGCGTCGGGTGGTGGAAGTGCTGGAAGCTCTACCTTCCCTCGTGCTCACTGGGTAGGAGTCAAATTTTGCCAATCGGAAACACTTGGCGCTGGAAAATCGGTGGAAGTTTCCCAGCCTATGAAGAAGAGTCGCCGAGGACCGAGGTCAAGGAGTTCTCAGTATAGGGGAGTCACCTTTTACAGAAGAACGGGTCGGTGGGAGTCTCATATATGGGACTGTGGAAAACAAGTGTATCTAGGTGGATTTGACACAGCACATGCAGCTGCTCGTGCGTATGATAGAGCGGCGATTAAGTTCCGAGGAGTGGAGGCGGACATAAACTTCAATATTGAAGATTATGAAGACGACTTGAAGCAGATGAGCAATCTGACCAAGGAAGAGTTCGTACACGTGCTTCGCCGACAAAGCACTGGATTTCCGAGAGGAAGCTCCAAATATAGAGGTGTAACTTTGCACAAGTGTGGAAGATGGGAGGCTCGAATGGGCCAGTTTTTAGGGAAAAAGTACGTCTATTTGGGTCTTTTTGACACCGAGATTGAAGCTGCAAGGGCTTATGACAAAGCAGCCATAAAATGCAACGGGAAAGAGGCTGTTACCAATTTTGATCCCAGCATCTATGAGAACGAGCTTAATTCCGAATCCACAGGTAAGGCTGCAGATCACAATCTGGATTTAAGTTTGGGGAATTCAAGTTCAAAGTCTGGCAATAATAATGCGTTGGGGAATCACGCCACAAATGCTGCAACCCATGATCAGCACCTGCCATCTGAGTCTAATTGGCGGAATGGGGGAAGCAAGTCTAAGCTGGTGAATATACTTCCAAAACCATGTAATAGAAGCAACAAGGACGCACATGGAAGGGATGTGCACGGGGAGAGTGAAGCATTGAGGATGCTAAGTCAAACCCACCTTCATTCTCCAGCCTCCAATGAAATGCAAAGATATGGTCCCTACAGGTCTCCTGGAGGAGAGTCTCAAATGCTTCAAAATTTCGCGCACATTCATCCACCAAATTTTCATTTTCCCAGCAGCAGCATTGGAGGCCGAATTGGAAGTGATCTTTCATTATCAATGGCCGATCAACAACAGTGGCAATCCGGGCCTCCACATTATTTAGCAACTGCTGCAGCATCATCAGGATTCCCACAACAGATAAGACCCTCTTCTCAAGGTTGGCTGCAGAAAAATGGGTTCCACACTCTCATGAGACCCTCGTGA 1563 0.4824 MWDLNDSPDQRKKDEESEGCSSLKTSIDGDDENNKGKRVGSVSNSSSSAVVIEDGSEEEEEDEEEEEEQGGRRSMKKRSSRIFGFSVTQDEESMDSDLPPVTRQFFPVEEADVAVASGGGSAGSSTFPRAHWVGVKFCQSETLGAGKSVEVSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYENELNSESTGKAADHNLDLSLGNSSSKSGNNNALGNHATNAATHDQHLPSESNWRNGGSKSKLVNILPKPCNRSNKDAHGRDVHGESEALRMLSQTHLHSPASNEMQRYGPYRSPGGESQMLQNFAHIHPPNFHFPSSSIGGRIGSDLSLSMADQQQWQSGPPHYLATAAASSGFPQQIRPSSQGWLQKNGFHTLMRPS 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2884g00001 520 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 96 412 - -
Mupr2884g00001 520 MobiDBLite consensus disorder prediction 1 79 - -
Mupr2884g00001 520 FunFam AP2-like ethylene-responsive transcription factor 259 319 - -
Mupr2884g00001 520 PRINTS Ethylene responsive element binding protein signature 261 272 IPR001471 GO:0003700|GO:0006355
Mupr2884g00001 520 PRINTS Ethylene responsive element binding protein signature 299 319 IPR001471 GO:0003700|GO:0006355
Mupr2884g00001 520 MobiDBLite consensus disorder prediction 334 359 - -
Mupr2884g00001 520 CDD AP2 259 319 IPR001471 GO:0003700|GO:0006355
Mupr2884g00001 520 ProSiteProfiles AP2/ERF domain profile. 168 224 IPR001471 GO:0003700|GO:0006355
Mupr2884g00001 520 Gene3D AP2/ERF domain 167 226 IPR036955 GO:0003700|GO:0006355
Mupr2884g00001 520 Gene3D AP2/ERF domain 259 318 IPR036955 GO:0003700|GO:0006355
Mupr2884g00001 520 MobiDBLite consensus disorder prediction 38 52 - -
Mupr2884g00001 520 MobiDBLite consensus disorder prediction 1 21 - -
Mupr2884g00001 520 SUPERFAMILY DNA-binding domain 259 319 IPR016177 GO:0003677
Mupr2884g00001 520 ProSiteProfiles AP2/ERF domain profile. 260 317 IPR001471 GO:0003700|GO:0006355
Mupr2884g00001 520 MobiDBLite consensus disorder prediction 53 68 - -
Mupr2884g00001 520 MobiDBLite consensus disorder prediction 148 167 - -
Mupr2884g00001 520 Pfam AP2 domain 168 216 IPR001471 GO:0003700|GO:0006355
Mupr2884g00001 520 Pfam AP2 domain 259 308 IPR001471 GO:0003700|GO:0006355
Mupr2884g00001 520 SUPERFAMILY DNA-binding domain 167 225 IPR016177 GO:0003677
Mupr2884g00001 520 CDD AP2 168 225 IPR001471 GO:0003700|GO:0006355
Mupr2884g00001 520 SMART rav1_2 168 230 IPR001471 GO:0003700|GO:0006355
Mupr2884g00001 520 SMART rav1_2 260 323 IPR001471 GO:0003700|GO:0006355
Mupr2884g00001 520 FunFam AP2-like ethylene-responsive transcription factor 167 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2884g00001 Mupr-Chr2884 5712 8783 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2884g00001 1 347 AP2-EREBP Transcription Factor Family AT4G36920 68.144 8.63e-138 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mupr2884g00001 AP2 3.6e-10 CL0081