LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr2884g00001	ATGTGGGATCTCAATGACTCACCCGATCAGAGGAAGAAGGACGAGGAATCCGAAGGGTGTTCTTCCCTCAAAACTTCCATCGACGGGGATGACGAAAACAACAAAGGCAAAAGGGTTGGATCTGTTTCCAATTCGAGCTCTTCCGCGGTGGTCATCGAGGACGGATCAGAGGAAGAGGAGGAAGACGAGGAGGAGGAAGAAGAACAAGGTGGCAGAAGAAGCATGAAGAAACGAAGCAGTAGGATTTTCGGGTTCTCTGTCACCCAAGATGAAGAGTCCATGGACAGTGACCTCCCACCTGTGACAAGACAGTTTTTTCCGGTGGAGGAGGCTGACGTGGCGGTTGCGTCGGGTGGTGGAAGTGCTGGAAGCTCTACCTTCCCTCGTGCTCACTGGGTAGGAGTCAAATTTTGCCAATCGGAAACACTTGGCGCTGGAAAATCGGTGGAAGTTTCCCAGCCTATGAAGAAGAGTCGCCGAGGACCGAGGTCAAGGAGTTCTCAGTATAGGGGAGTCACCTTTTACAGAAGAACGGGTCGGTGGGAGTCTCATATATGGGACTGTGGAAAACAAGTGTATCTAGGTGGATTTGACACAGCACATGCAGCTGCTCGTGCGTATGATAGAGCGGCGATTAAGTTCCGAGGAGTGGAGGCGGACATAAACTTCAATATTGAAGATTATGAAGACGACTTGAAGCAGATGAGCAATCTGACCAAGGAAGAGTTCGTACACGTGCTTCGCCGACAAAGCACTGGATTTCCGAGAGGAAGCTCCAAATATAGAGGTGTAACTTTGCACAAGTGTGGAAGATGGGAGGCTCGAATGGGCCAGTTTTTAGGGAAAAAGTACGTCTATTTGGGTCTTTTTGACACCGAGATTGAAGCTGCAAGGGCTTATGACAAAGCAGCCATAAAATGCAACGGGAAAGAGGCTGTTACCAATTTTGATCCCAGCATCTATGAGAACGAGCTTAATTCCGAATCCACAGGTAAGGCTGCAGATCACAATCTGGATTTAAGTTTGGGGAATTCAAGTTCAAAGTCTGGCAATAATAATGCGTTGGGGAATCACGCCACAAATGCTGCAACCCATGATCAGCACCTGCCATCTGAGTCTAATTGGCGGAATGGGGGAAGCAAGTCTAAGCTGGTGAATATACTTCCAAAACCATGTAATAGAAGCAACAAGGACGCACATGGAAGGGATGTGCACGGGGAGAGTGAAGCATTGAGGATGCTAAGTCAAACCCACCTTCATTCTCCAGCCTCCAATGAAATGCAAAGATATGGTCCCTACAGGTCTCCTGGAGGAGAGTCTCAAATGCTTCAAAATTTCGCGCACATTCATCCACCAAATTTTCATTTTCCCAGCAGCAGCATTGGAGGCCGAATTGGAAGTGATCTTTCATTATCAATGGCCGATCAACAACAGTGGCAATCCGGGCCTCCACATTATTTAGCAACTGCTGCAGCATCATCAGGATTCCCACAACAGATAAGACCCTCTTCTCAAGGTTGGCTGCAGAAAAATGGGTTCCACACTCTCATGAGACCCTCGTGA	1563	0.4824	MWDLNDSPDQRKKDEESEGCSSLKTSIDGDDENNKGKRVGSVSNSSSSAVVIEDGSEEEEEDEEEEEEQGGRRSMKKRSSRIFGFSVTQDEESMDSDLPPVTRQFFPVEEADVAVASGGGSAGSSTFPRAHWVGVKFCQSETLGAGKSVEVSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYENELNSESTGKAADHNLDLSLGNSSSKSGNNNALGNHATNAATHDQHLPSESNWRNGGSKSKLVNILPKPCNRSNKDAHGRDVHGESEALRMLSQTHLHSPASNEMQRYGPYRSPGGESQMLQNFAHIHPPNFHFPSSSIGGRIGSDLSLSMADQQQWQSGPPHYLATAAASSGFPQQIRPSSQGWLQKNGFHTLMRPS	520

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mupr2884g00001	520	PANTHER	AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR	96	412	-	-
Mupr2884g00001	520	MobiDBLite	consensus disorder prediction	1	79	-	-
Mupr2884g00001	520	FunFam	AP2-like ethylene-responsive transcription factor	259	319	-	-
Mupr2884g00001	520	PRINTS	Ethylene responsive element binding protein signature	261	272	IPR001471	GO:0003700\|GO:0006355
Mupr2884g00001	520	PRINTS	Ethylene responsive element binding protein signature	299	319	IPR001471	GO:0003700\|GO:0006355
Mupr2884g00001	520	MobiDBLite	consensus disorder prediction	334	359	-	-
Mupr2884g00001	520	CDD	AP2	259	319	IPR001471	GO:0003700\|GO:0006355
Mupr2884g00001	520	ProSiteProfiles	AP2/ERF domain profile.	168	224	IPR001471	GO:0003700\|GO:0006355
Mupr2884g00001	520	Gene3D	AP2/ERF domain	167	226	IPR036955	GO:0003700\|GO:0006355
Mupr2884g00001	520	Gene3D	AP2/ERF domain	259	318	IPR036955	GO:0003700\|GO:0006355

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr2884g00001	Mupr-Chr2884	5712	8783	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr2884g00001	1	347	AP2-EREBP Transcription Factor Family	AT4G36920	68.144	8.63e-138	403

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	AP2 or ERF-AP2	Mupr2884g00001		AP2	3.6e-10	CL0081

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr2884g00001	K09284		-	gmx:100792442	866.3

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