Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2882g00004 ATGGGAGAGAACATGAAGTGTGAACAAGCTGGTCTCATTGATGAGTTAGTGCAAGGGAAGGAGCTAGCAAAGCAGCTCTCTGACCATCTATTCTTAGCACCATCATCTTCATCTCATGAAACAAATGAAGTCTTAATTGAGAAAATACTTTCCACCTATGAGAAAGCACTTGCCATGCTGAATTGGAAGGCTAATGTAGGAGAAAGTAAGGCCAACAATGGCGGCATGATGGATTCCCTTTCTTCTTTCACAAATGGCAGCCCCAAAAGAGAGGCTCTAGAGCCAGTGGTTAAGCACAAAGATGTCTCTAAGAAAAGAAAGACCATGCCAACGTGGACAGAGCAAGTGAAGGTGTGCTTGGGAACAGCACATGATGGACCTCTGGATGATGGCTATAGCTGGAGAAAATATGGGCAGAAGGATATTCTTGGAGCTAAGTATCCAAGAGGATATTACAGATGCACATATAGAAATGTACAAGGATGTCTGGCCACTAAGCAAGTGCAAAAGTCAAATGAAGACCCAATGATATGTGAGATAACCTACAGAGGAAGGCACACATGCAGCCAAGCAAGTCACTTAACCAAGGCAGTAGCACCCCCATCAAAAGCAAAGATGGGGTTGGGAGAAAACAAGCACCACACTACCACCCATCAAAAGAATCAACCACAAGAAGAGAAAATAGAACAACCCCAAGAAACAATTTTGTCTTTTGGATCTCCAGGTGTTAAAATAGAGGACATGATCATGGACCACAAGGATGACATATTCCCATCATTTTGCTTTTCTTCTCCATCAATAGGGTCTGAAAACGAGGACAACAACATGTTCCCTTACGCCATGATTGAAGACAATTTAATGGAAACCTTCTCTCCTGCATTCATATCTCCAACAACTTCAGAATCAAACATGTTCTGCTTGTCACCATGTCCCTGGGAGAGCACTGGACTAGGCCAAAGTGTGCAAAGCTCAGAGTCTGATATCACTGATACAGTTTCAGCCCCAACTTCAGTCTCCAATTCCCCAATCATGGACCTTGATTTGTTCCTTAAGTTCGATTTCGACACGGATTTCCCTATCAACACCACAGAACTTTGCACTTGA 1104 0.4321 MGENMKCEQAGLIDELVQGKELAKQLSDHLFLAPSSSSHETNEVLIEKILSTYEKALAMLNWKANVGESKANNGGMMDSLSSFTNGSPKREALEPVVKHKDVSKKRKTMPTWTEQVKVCLGTAHDGPLDDGYSWRKYGQKDILGAKYPRGYYRCTYRNVQGCLATKQVQKSNEDPMICEITYRGRHTCSQASHLTKAVAPPSKAKMGLGENKHHTTTHQKNQPQEEKIEQPQETILSFGSPGVKIEDMIMDHKDDIFPSFCFSSPSIGSENEDNNMFPYAMIEDNLMETFSPAFISPTTSESNMFCLSPCPWESTGLGQSVQSSESDITDTVSAPTSVSNSPIMDLDLFLKFDFDTDFPINTTELCT 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2882g00004 367 SMART WRKY_cls 128 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr2882g00004 367 FunFam WRKY transcription factor 53 114 191 - -
Mupr2882g00004 367 MobiDBLite consensus disorder prediction 208 227 - -
Mupr2882g00004 367 Pfam WRKY DNA -binding domain 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr2882g00004 367 ProSiteProfiles WRKY domain profile. 123 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr2882g00004 367 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 8 322 IPR044810 GO:0003700
Mupr2882g00004 367 Gene3D WRKY domain 115 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr2882g00004 367 MobiDBLite consensus disorder prediction 208 232 - -
Mupr2882g00004 367 SUPERFAMILY WRKY DNA-binding domain 126 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2882g00004 Mupr-Chr2882 23423 25774 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2882g00004 3 194 WRKY Transcription Factor Family AT5G24110 46.667 2.15e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr2882g00004 WRKY 2.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2882g00004 - - gmx:100170747 513.457