Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2873g00026 ATGTCAAGGTTTTTTCTAGACATTATTTCTCCAAAGGGAGGGAGTTCTCTCATGTCACTAACTATTCTCTTCTTTGTCTTGCAATTGTTTGCATGGTCAAGGGTACTAGTAGCTAATGAAAAAATAGACAAGTGCTTAAGCACCCCAAGGTCCATTATGAACATCGGTGCTGTTCTTGATTTGGATTCACTAATGGGTAAGCAGCAGAAAATAGCCATGGAAATTGCAGTCCAAGAGTTCAATAGCTTGAGTTGTTCCAAGCTGGATTTGAATATACAAAATTCCCACGGGAATTCGGCTCGAGCAATTGCTAGTGCTATGGATCTGGCACAGAGCAAGCAGGTGCTAGCCATCATAGGAACAATAACACACAACGAAGCAACTCTGGCAAGTGAGTTAAATGACAAGATAGAGAAAGTTCCTATATTGTCTCTAACTTCTCCCGCAGCAAGTACTGAGATATTATCTCCACAATTGCCGCACTTCATCCAAATTGGCAATGATATCAAGATTCACATGCAATGCATTGCAGCCACTGTAGGAGAATTCAGATGGCGAAAGGTGACAGTAATTTATGAACTTAGCAACGGGTTTTCCTATGATCCAGGGATACTGCTTGGTCTCTCCTATTCTCTTCGACTTGTTGGTTCTGAGATTGATGACCATTTAGTCTTGCCTTCCTTGTCCTCTCTATCAGACCCAAAATCTACTATTGAAAATGAGCTTAATAGGCTCAAAAACAAGAGTAACAGGGTCTTCTTGATTGTGCAATCTTCTTTAGAGATGGCTCACATACTTTTTGAGAAAGCAAAGCAAATGAGTTTGATGGAAAAAGGTTCTGTGTGGGTTATCCCAGATGGGGTTGCTGGCCTTCTTGATTCAGTTAACTCCTCTGTCATCCTCAACATGCAAGGAGTTATTGGATTTAAGACACACTACATGGAAACAAGCGAGGCATTTAAAAGGTTCAAGTTAAAATTCCGAAGAAGGTTTGCATTGGAGTTCCCTGAAGAAGAGAACATTACCCCAAGTTTATTTGCACTTCAATCATATGATGCAACCTGGGCTGTTGCTCAGGCTGCAAGGGAATCACAAGAGATGTTTACTCCTGAACAATTATTCAAAAATTACCTTTCCAGGAATGGCAAATTACTGCAATCACCAGCCTTCAATATAATAAATGTGATAGGTAAAAGTTACAGAGAGTTGACATTGTGGTCTCCAGCACTGGGTTTCTCCGAGAATCTTGTCTCGCATCAGCTAACAGAGATGAACACAGACACTGCTTCTACAGGAGTTTTGAGTACAGTTTATTGGCCTGGAGGCATACAGTTTGTTCCAAAGGGATGGATTCACAGCACCCAGGAGAGGACGTTGCAAATAGGAGTGCCTGCAAAAGGTGCCTTTACCCAGTTTGTGAATGTGACATACGATCAGAACAAGAATAATATTTCTGTTACCGGTTTCTCAATCGATGTCTTCAAAGCAGCCGTTCATAATTTGCCTTATGACTTGAAATACACGTTCGTCCCCTTCAATGGGTCTTATGATGAAATGGTGGAGCAAGTCTACAGCAAGACATTGGATGCTGCTGTGGGAGATACCTCAATAATGGCATATAGATATGATTTAGTCGACTTCTCACAACCTTATGTCGAATCTAGCCTCGACATGGTGGTTACGGAGCAATCAACTAAATCAAAAGGAACATGGGTTTTTTTGGATGCCTTCACAAGAGATATGTGGTTGATTATGGCAGCATTGCACATTTTCGTGGGATTTGTCATTTGGTTAATTGAACGGCAAGTTAATGAAGAACTAAAGGGATTGGGGTCCATGCTTTGGTTTTTAGTCACTGTAATATTCTATGCACACAGTAAGTTCTCTAACATGAAATACAAGTTGAAAAGATTAGGGCCTGTTTGTTTCTTTTTTTCATTTTATGTTTTCACTTTTAATTACAAAATTGTCGCATTGGTACATTTCTTATACACAGGAGAACCAATAAAAAGCCCCTTGGCTCGAACTGTGCTGGCGCCATGGTTATTTGTGATTCTCATTGCAACAAGTACTTTCACAGCAAGTTTGACTTCCATGATGACTGTTTCGCAACTAGAGCCATCTGTGTTAGATATCCAAACCCTTCAGAAAAGAAATTCCCCAGTTGGTTGTGATGGAAACTCGTTCATTGTGAAGTATCTGACTGACGTACTAAGATTCAAGCCTGAGAACATTAGGAAAATTAACTCCATAAGTGATTACCCTGCTGCCTTTCAGAACAAGGATATTGAAGCCGCTTTCTTTGTTGCGCCTCATGCTAAAGTCTTTCTGGCAATGTACTCATGCAAGGGCCTCATCAAAGCAGGGAACACTTTCAGGCTTGGTGGCTTTGGTTTTGTGTGTCTCTCCCCTCTCATTGTCACCGTATTTCCCAAGGGTTCCACTCTGGCTACTGACATATCCAAGGCATTGCTGAAAGTGATAGAGAGTGGAGTAACAGAACAACTAGAAAAAGATATGCTTTCAATCGGAGGTAATGCCAGCTGTTCTCGTTATGAGAGCAAAGCAAAAGATGGGTTGTCGACAGGATTTCAGCCTTTCCTTGGCCTATTTTACATCTGTTCCACTGTTGCTATTCTGGCATTATTATATAATATGATTTGTCTGTTAATGAAGAATGTAGAGACCTTCACTAGCTACATACATGTAACATTAACACAATTAAGGAGAATATGGAGATGGACTACCACATATTTTGCTCGGAGCTGTTCAAGACTTCAATCAGGGAGCATGAAAAGTGTAAGTAATGCCACAGTAACAAGAAATGCAGAGGAGACGGTCATTAATAGTCAGCAAAGCACAGTTGTTGGTGAGCTTATTGATATAGTATTGGCTGCTCATGCTTCCTAA 2910 0.4072 MSRFFLDIISPKGGSSLMSLTILFFVLQLFAWSRVLVANEKIDKCLSTPRSIMNIGAVLDLDSLMGKQQKIAMEIAVQEFNSLSCSKLDLNIQNSHGNSARAIASAMDLAQSKQVLAIIGTITHNEATLASELNDKIEKVPILSLTSPAASTEILSPQLPHFIQIGNDIKIHMQCIAATVGEFRWRKVTVIYELSNGFSYDPGILLGLSYSLRLVGSEIDDHLVLPSLSSLSDPKSTIENELNRLKNKSNRVFLIVQSSLEMAHILFEKAKQMSLMEKGSVWVIPDGVAGLLDSVNSSVILNMQGVIGFKTHYMETSEAFKRFKLKFRRRFALEFPEEENITPSLFALQSYDATWAVAQAARESQEMFTPEQLFKNYLSRNGKLLQSPAFNIINVIGKSYRELTLWSPALGFSENLVSHQLTEMNTDTASTGVLSTVYWPGGIQFVPKGWIHSTQERTLQIGVPAKGAFTQFVNVTYDQNKNNISVTGFSIDVFKAAVHNLPYDLKYTFVPFNGSYDEMVEQVYSKTLDAAVGDTSIMAYRYDLVDFSQPYVESSLDMVVTEQSTKSKGTWVFLDAFTRDMWLIMAALHIFVGFVIWLIERQVNEELKGLGSMLWFLVTVIFYAHSKFSNMKYKLKRLGPVCFFFSFYVFTFNYKIVALVHFLYTGEPIKSPLARTVLAPWLFVILIATSTFTASLTSMMTVSQLEPSVLDIQTLQKRNSPVGCDGNSFIVKYLTDVLRFKPENIRKINSISDYPAAFQNKDIEAAFFVAPHAKVFLAMYSCKGLIKAGNTFRLGGFGFVCLSPLIVTVFPKGSTLATDISKALLKVIESGVTEQLEKDMLSIGGNASCSRYESKAKDGLSTGFQPFLGLFYICSTVAILALLYNMICLLMKNVETFTSYIHVTLTQLRRIWRWTTTYFARSCSRLQSGSMKSVSNATVTRNAEETVINSQQSTVVGELIDIVLAAHAS 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2873g00026 969 Gene3D - 570 741 - -
Mupr2873g00026 969 Gene3D - 173 340 - -
Mupr2873g00026 969 FunFam Glutamate receptor 454 569 - -
Mupr2873g00026 969 CDD PBP1_GABAb_receptor_plant 54 416 IPR044440 -
Mupr2873g00026 969 Pfam Bacterial extracellular solute-binding proteins, family 3 483 838 IPR001638 -
Mupr2873g00026 969 Pfam Ligand-gated ion channel 839 875 IPR001320 GO:0015276|GO:0016020
Mupr2873g00026 969 Pfam Receptor family ligand binding region 70 366 IPR001828 -
Mupr2873g00026 969 Gene3D - 41 172 - -
Mupr2873g00026 969 Gene3D - 451 569 - -
Mupr2873g00026 969 SMART GluR_14 458 843 IPR001320 GO:0015276|GO:0016020
Mupr2873g00026 969 CDD GluR_Plant 457 841 - -
Mupr2873g00026 969 SUPERFAMILY Periplasmic binding protein-like I 51 450 IPR028082 -
Mupr2873g00026 969 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 54 895 IPR015683 -
Mupr2873g00026 969 SUPERFAMILY Periplasmic binding protein-like II 433 838 - -
Mupr2873g00026 969 PIRSF IGluLR_plant 372 657 IPR017103 -
Mupr2873g00026 969 PIRSF IGluLR_plant 16 377 IPR017103 -
Mupr2873g00026 969 PIRSF IGluLR_plant 641 958 IPR017103 -
Mupr2873g00026 969 FunFam Glutamate receptor 172 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2873g00026 Mupr-Chr2873 62284 67528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2873g00026 106 883 Ion Channels AT5G11210 30.695 3.21e-105 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2873g00026 - - gmx:100778941 1383.24