Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2872g00001 ATGGCTGAAGTTGAATACCATGCAAAGTCCAGCACTAGCACTGCTACACCTCTAAAGCTCTTCGGCATCAACATTAACAAGAGCCCAAAAGATCAAACTCGTGAAGAAGCAGGTTCGGATTCTGAGTCTTTCAATTCACGCGATGCAAGAAAATACGAGTGCCGCTACTGCTGCAGAGAGTTCGCAAACTCACAGGCACTAGGAGGACACCAAAACGCGCACAAGAAAGAAAGACAGCTCTTGAAACGTGCTCAAATGCAAGCTGCTCGTGGCTTTGTCGCTTCACATATCCAAAACGCAATCATGTCAGGGTTCTCCCCACCGTATCACCCACCTTTGTTGCGGCTACCACCACCACCACCACCACCACTACCACCTGCTGTTGGTGCCTCCATCACCGACGGCCGAGGCCACCATCACCTTCTGCCGGGTTTCTCTGGCTTCGGCCGCGGCGATGCTGGTGATCGTCAACGAGGATCAATGTTGCATGCACCATCTGCCCCAACCTTTTCTTTAACATATCCTCGGAACCTTCATTATCCTCCTTGTTTAAAAAATCCTTCACTTAAAACAACTTTTTCTGTTCGCTGTTCAGTATCACAGACAAATAATGGAGCTAAAGTGGAGTATACTCCTTGGCTCATTGTTGGCTTGGGAAATCCTGGAAACAAATACCATGGCACCAGGCACAATGTTGGATTTGAAATAATTGATAGCCTTTCTCGAGCAGAAGGGATTCGGATGAACACAATACAATCAAAAGCCTTGATTGGAATAGGTTCTGTTGGAGAAGTACCAATTTTGCTGGCAAAGCCCCAAACATACATGAATTTTAGTGGGGAATCGGTTGGACCACTTGCTGCATATTATCAAGTACCCTTGCGCCATATTCTACTAGTTTATGATGAAACAAGCCTTCCAAATGGTGTTTTAAGGCTTCAACCTAAAGGTGGACATGGGCATCACAATGGAATAAAAAATGTGATGGGCCATTTGGATGGTTGTAGTGCTTTTCCTCGACTTGCAGTCGGAATTGGAAATCCTCCTGGATCTATGGATTTAAGAGCTTATCTTCTACAAAAATTCAGTTTTGTGGAACGAAAGCAGATTGATGCTTCATTGGAGCAAGGAGTTTCAGCCGTAAGGACCCTAGTGCTCAATGGTTTTGACCAGCATGTCAATAGATTCAATTTAGGGCAAAAATACAAGTACCATAAAGTTTAA 1224 0.4485 MAEVEYHAKSSTSTATPLKLFGININKSPKDQTREEAGSDSESFNSRDARKYECRYCCREFANSQALGGHQNAHKKERQLLKRAQMQAARGFVASHIQNAIMSGFSPPYHPPLLRLPPPPPPPLPPAVGASITDGRGHHHLLPGFSGFGRGDAGDRQRGSMLHAPSAPTFSLTYPRNLHYPPCLKNPSLKTTFSVRCSVSQTNNGAKVEYTPWLIVGLGNPGNKYHGTRHNVGFEIIDSLSRAEGIRMNTIQSKALIGIGSVGEVPILLAKPQTYMNFSGESVGPLAAYYQVPLRHILLVYDETSLPNGVLRLQPKGGHGHHNGIKNVMGHLDGCSAFPRLAVGIGNPPGSMDLRAYLLQKFSFVERKQIDASLEQGVSAVRTLVLNGFDQHVNRFNLGQKYKYHKV 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2872g00001 407 SUPERFAMILY Peptidyl-tRNA hydrolase-like 211 397 IPR036416 GO:0004045
Mupr2872g00001 407 MobiDBLite consensus disorder prediction 29 45 - -
Mupr2872g00001 407 NCBIfam aminoacyl-tRNA hydrolase 213 383 IPR001328 GO:0004045
Mupr2872g00001 407 FunFam Peptidyl-tRNA hydrolase 209 400 - -
Mupr2872g00001 407 ProSitePatterns Peptidyl-tRNA hydrolase signature 1. 225 238 IPR018171 GO:0004045
Mupr2872g00001 407 SUPERFAMILY beta-beta-alpha zinc fingers 49 79 IPR036236 -
Mupr2872g00001 407 PANTHER PEPTIDYL-TRNA HYDROLASE 202 397 IPR001328 GO:0004045
Mupr2872g00001 407 ProSitePatterns Zinc finger C2H2 type domain signature. 54 74 IPR013087 -
Mupr2872g00001 407 MobiDBLite consensus disorder prediction 26 45 - -
Mupr2872g00001 407 ProSitePatterns Peptidyl-tRNA hydrolase signature 2. 318 328 IPR018171 GO:0004045
Mupr2872g00001 407 Pfam Peptidyl-tRNA hydrolase 214 397 IPR001328 GO:0004045
Mupr2872g00001 407 ProSiteProfiles Zinc finger C2H2 type domain profile. 52 79 IPR013087 -
Mupr2872g00001 407 Gene3D Classic Zinc Finger 33 100 - -
Mupr2872g00001 407 Hamap Peptidyl-tRNA hydrolase [pth]. 212 390 IPR001328 GO:0004045
Mupr2872g00001 407 Gene3D - 197 400 IPR036416 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2872g00001 Mupr-Chr2872 329 7452 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2872g00001 11 121 C2H2 Transcription Factor Family AT1G67030 56.667 1.39e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2872g00001 K01056 - gmx:100804132 447.203