Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2871g00002 ATGGAGGGGAGAACAAGCTCTTTACTCCCTCCTGGCTTCAGGTTTCACCCCACCGATGAGGAACTAATCGTGTACTACCTTTGCAACCAAGCCACATCAAGGCCATGCCCTGCATCAATCATCCCCGAAGTGGATATTTATAAATTTGATCCATGGGAATTACCTGATAAAAGTGACTTTGGAGAAAATGAATGGTACTTCTTTAGCCCACGAGACAGGAAGTACCCAAATGGGGTGAGGCCTAATAGGGCAACCGTGTCTGGGTATTGGAAGGCTACTGGCACAGACAAGGCAATCTTCAGTGGATCTAAGCATGTTGGGGTGAAGAAATCTTTGGTTTTTTACAAGGGTAAGCCACCAAAGGGTCTCAAGACAGAGTGGATTATGCATGAGTATCGATTAATTGGATCAAGAAGACAAGCCAATAGACAAATTGGATCCATGAGGTTGGATGACTGGGTCTTGTGTAGGATCTATAAGAAGAAGAACATGGGAAAATCATTGGAGGCAAAAGAGGACTACCCAATAGCCCAAATGAATCTTGCACCTGCAAATAATGAGGTTGAAGAGGAAGTAATGAAATTTCCAAGGACTAGTTCCCTTACTCATCTTCTGGAAATGGATTACTTGGGTCCAATATCACAGATATTATCTGATGGCTCATACAATTCAACCTTTGACTTTCAAATTAACACTGCCAATGGTGGAATAGACCCGTTCATAAAACCACAGCTGGTTGACATGCCTAATAACCCTTATGCAGTAGATTCAGGGAAGTACCAAGTGAAACAGAACAGCACCATCAACCCCACCATATTTGTGAACCAAGTGTATGACCAGAGAGGATAA 849 0.4299 MEGRTSSLLPPGFRFHPTDEELIVYYLCNQATSRPCPASIIPEVDIYKFDPWELPDKSDFGENEWYFFSPRDRKYPNGVRPNRATVSGYWKATGTDKAIFSGSKHVGVKKSLVFYKGKPPKGLKTEWIMHEYRLIGSRRQANRQIGSMRLDDWVLCRIYKKKNMGKSLEAKEDYPIAQMNLAPANNEVEEEVMKFPRTSSLTHLLEMDYLGPISQILSDGSYNSTFDFQINTANGGIDPFIKPQLVDMPNNPYAVDSGKYQVKQNSTINPTIFVNQVYDQRG 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2871g00002 282 Gene3D NAC domain 18 166 IPR036093 GO:0003677|GO:0006355
Mupr2871g00002 282 PANTHER NAC TRANSCRIPTION FACTOR 56 9 179 - -
Mupr2871g00002 282 FunFam NAC transcription factor 18 165 - -
Mupr2871g00002 282 SUPERFAMILY NAC domain 6 161 IPR036093 GO:0003677|GO:0006355
Mupr2871g00002 282 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Mupr2871g00002 282 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2871g00002 Mupr-Chr2871 17457 19109 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2871g00002 1 216 NAC Transcription Factor Family AT1G69490 67.105 2.40e-112 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr2871g00002 NAM 2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2871g00002 - - gmx:732552 539.265