Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr286g00011 ATGGCTCAAAATAATAATAACAATAATGTGTTAGAGCTCAATCTTGGTTTAGGGCAGTCACCGAGGCAAAGATCCCCCGCACCGTTTTTGTTGAAGACATACGATTTGTTGGAAGAAGGAGAGGCTGAAGATAACACCAATTGCAAAATTGTGTCGTGGAATTCACAAGGGACTGGTTTTGTTGTCTGGTCTCCAGCTGAATTCTCTCAACTCACCTTGCCTAGATATTTCAAGCACAACAACTTCTCTAGCTTCATTCGCCAATTGAATACATATGGATTTAAGAAAATATCATCCAAAAGATGGGAATTCGAGCACGAGAAATTTCAGAGAGGTTGCAGGCACAAGCTAGGTGAAATCACAAGGAAAAAGTGCGAGCCAAGTGTGTTTCCTGCATACCTCAAGTCTTCTTCAGAGGAAAATGCAACAAGCTCCACGGAAGAAAACAATCACCAACTACTTATGGAGGAGAATAAGAACCTTAAGAAGGAGAGATTAGAGCTTCAAATGCAGATAGATGAATGCAAAGCACTTGAAATGAAGTTGTTGGCATGCCTCTCTCAGTTTATGGACACCCACAACAATAAAGTTAGGAGACTATGTTAA 606 0.4059 MAQNNNNNNVLELNLGLGQSPRQRSPAPFLLKTYDLLEEGEAEDNTNCKIVSWNSQGTGFVVWSPAEFSQLTLPRYFKHNNFSSFIRQLNTYGFKKISSKRWEFEHEKFQRGCRHKLGEITRKKCEPSVFPAYLKSSSEENATSSTEENNHQLLMEENKNLKKERLELQMQIDECKALEMKLLACLSQFMDTHNNKVRRLC 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr286g00011 201 SMART hsfneu3 25 123 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr286g00011 201 PRINTS Heat shock factor (HSF) domain signature 34 57 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr286g00011 201 PRINTS Heat shock factor (HSF) domain signature 85 97 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr286g00011 201 PRINTS Heat shock factor (HSF) domain signature 72 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr286g00011 201 Gene3D - 21 124 IPR036388 -
Mupr286g00011 201 Pfam HSF-type DNA-binding 29 123 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr286g00011 201 ProSitePatterns HSF-type DNA-binding domain signature. 73 97 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr286g00011 201 Coils Coil 144 181 - -
Mupr286g00011 201 FunFam Heat stress transcription factor A-6b 22 124 - -
Mupr286g00011 201 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 22 178 IPR027725 -
Mupr286g00011 201 SUPERFAMILY "Winged helix" DNA-binding domain 25 123 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr286g00011 Mupr-Chr286 103558 106220 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr286g00011 18 193 HSF AT5G62020 35.577 9.09e-39 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mupr286g00011 HSF_DNA-bind 1.1e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr286g00011 K09419 - gmx:100789792 320.087