Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr286g00009 ATGGCGAGTCTGTTCGGGTTATCGTCTTCCAGTTCGACCTCGATGACCGTGACCAACACGCCCTCGCAGGACCTCGCCCTCACCAACCATGCCTTCTGTTCCGCCTCCGATCTTCCCAAATTCGCCGTCCCCGGTCACAAGAACCTCTACCTCGCTTCCATCGATTCCTTCGTCTTCTCTCTTGCATATCCTTTAGATACTGCTCATGAGAACATACGCAGCGGCCATATTGCGTTGAATTCCATTCAACGTCGGTGTGCCAAAGTTTCTTCTGCGGAATCCGTACCTGTGTGCTCATTTGTGCCACCTGACAACTTCAACCTCGCACTGCTAACCCTGGAATTGGACTTTGTTAAAAAAGGGACTAAGAGTGAACAGATTGATGCCGTTGTACTGGCTAAGCAACTTCGGAAGAGGTTTATAAACCAGGTTATGACTGTCGGGCAGAAAGTGTTATTTGAGTATCGTGGAAATAATTATAGCTTTACTGTCAGTCAAGCTGCTGTTGAGGGCCAAGAGAAGTCTAATTCTCTTGAAAGAGGGATGATTTCAGATGACACATACATTGTTTTTGAAACATCACGCGATAGTGGAATTAAGATTGTCAATCAACGTGAGGCTGCCACTAGCAACATTTTCAAGCAGAAAGAATTTAACCTTCAGTCTCTGGGTATTGGTGGTCTGAGTGCAGAGTTTGCAGATATATTTCGAAGAGCTTTTGCCTCTCGTGTTTTCCCTCCCCATGTGACATCTAAATTAGGAATCAAGCATGTGAAGGGCATGCTTCTTTATGGGCCTCCTGGAACTGGAAAGACACTTATGGCACGTCAAATTGGAAAAATTTTGAATGGGAAGGAACCAAAGATTGTAAATGGCCCTGAAGTTTTGAGCAAATTTGTTGGTGAAACTGAAAAGAATGTGAGAGACCTTTTTGCTGATGCTGAACAGGATCAGAGGAGCCGAGGTGATGAAAGTGATTTGCATGTTATAATCTTTGATGAAATTGATGCTATTTGTAAGTCACGAGGTTCAACTCGAGATGGTACTGGAGTTCATGATAGCATCGTAAATCAGCTTCTTACTAAGATAGATGGTGTGGAGTCACTAAATAATGTTTTGCTTATTGGAATGACTAACAGAAAGGACATGCTTGATGAAGCTCTCTTAAGACCAGGGAGGTTGGAAGTCCAGGTTGAGATAAGCCTTCCTGATGAAAATGGTCGATTGCAAATTCTTCAAATTCATACTAACAAAATGAAAGAGAATTCTTTTCTAGCTCCTGATGTGAACCTTCAAGAGCTTGCTGCTCGAACGAAAAACTACAGTGGTGCCGAACTTGAAGGTGTGGTGAAAAGTGCCGTCTCATATGCTTTAAATAGACAATTGAGTCTAGATGATCTCACTAAGCCAGTCGAGGAAGAGAACATTAAGGTTACAATGGATGACTTTTTGAATGCACTCCAAGAAGTTACTCCTGCATTTGGAGCTTCAACTGGTGATCTTGAAAGATGCAGACTCAATGGCATGGTGGAATGTGGTGATCGACATAAGCACATTTATCAAAGAGCAATGCTACTTGTGGAGCAAGTTAAAGTTAGTAAAGGAAGCCCACTTGTCACTTGCCTCCTGGAAGGTTCCAGTGGCAGTGGTAAAACTGCACTTGCAGCTACTGTTGGTATTGACAGTGACTTCCCATATGTCAAGATAGTTTCAGCTGAATCAATGATTGGTCTACATGAGAGCACCAAGTGTGCACAGATTATTAAGGTTTTTGAGGATGCATACAAGTCACCATTGAGTGTCATCATTCTTGATGACATTGAGAGATTATTGGAGTATGTAGCCATTGGTCCTCGTTTTTCAAACTCGATTTCTCAGACACTACTGGTTCTGCTCAAACGGCTTCCTCCAAAGGGGAAAAAACTCATGGTTATTGGCACGACAAGTGAACTGGGTTTCTTGGACTCAATTGGATTTTGTGATACCTTTTCTGTTACTTACCATGTTCCTACCTTGAACACAAAGGATGCAAAGAAGGTCCTAGAACAGTTGAATGTGTTTTCTAATGAAGATATTGATTCTGCTGCTGAGGCATTGAATGATATATCTATCAGGAAGCTATACATGTTGATTGAGATGGCAGCGCAAGGGGAGCAAGGTGGATCTGCAGAAGCCATCTATTCTGGCAAAGAGAAGATTAATATCTCTCATTTCTATGACTGCCTCCAGGATGATCTCAATCGTAATCATGGAAACACACAAGATAGATAA 2271 0.4249 MASLFGLSSSSSTSMTVTNTPSQDLALTNHAFCSASDLPKFAVPGHKNLYLASIDSFVFSLAYPLDTAHENIRSGHIALNSIQRRCAKVSSAESVPVCSFVPPDNFNLALLTLELDFVKKGTKSEQIDAVVLAKQLRKRFINQVMTVGQKVLFEYRGNNYSFTVSQAAVEGQEKSNSLERGMISDDTYIVFETSRDSGIKIVNQREAATSNIFKQKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKILNGKEPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQRSRGDESDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVVKSAVSYALNRQLSLDDLTKPVEEENIKVTMDDFLNALQEVTPAFGASTGDLERCRLNGMVECGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLEGSSGSGKTALAATVGIDSDFPYVKIVSAESMIGLHESTKCAQIIKVFEDAYKSPLSVIILDDIERLLEYVAIGPRFSNSISQTLLVLLKRLPPKGKKLMVIGTTSELGFLDSIGFCDTFSVTYHVPTLNTKDAKKVLEQLNVFSNEDIDSAAEALNDISIRKLYMLIEMAAQGEQGGSAEAIYSGKEKINISHFYDCLQDDLNRNHGNTQDR 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr286g00009 756 ProSitePatterns AAA-protein family signature. 372 390 IPR003960 GO:0005524|GO:0016887
Mupr286g00009 756 FunFam Vesicular-fusion ATPase SEC18 213 403 - -
Mupr286g00009 756 Pfam AAA+ lid domain 428 483 IPR041569 -
Mupr286g00009 756 PANTHER VESICULAR-FUSION PROTEIN NSF 13 745 IPR039812 GO:0016887|GO:0035494
Mupr286g00009 756 Gene3D - 210 403 IPR027417 -
Mupr286g00009 756 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 502 718 IPR027417 -
Mupr286g00009 756 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 236 497 IPR027417 -
Mupr286g00009 756 Gene3D - 104 201 - -
Mupr286g00009 756 Gene3D - 500 670 IPR027417 -
Mupr286g00009 756 FunFam Vesicle-fusing ATPase 403 490 - -
Mupr286g00009 756 Pfam Cell division protein 48 (CDC48), domain 2 126 187 IPR004201 -
Mupr286g00009 756 FunFam Vesicle-fusing ATPase protein 12 100 - -
Mupr286g00009 756 FunFam vesicle-fusing ATPase isoform X1 499 670 - -
Mupr286g00009 756 Pfam ATPase family associated with various cellular activities (AAA) 542 655 IPR003959 GO:0005524|GO:0016887
Mupr286g00009 756 Pfam ATPase family associated with various cellular activities (AAA) 261 401 IPR003959 GO:0005524|GO:0016887
Mupr286g00009 756 SUPERFAMILY ADC-like 12 97 IPR009010 -
Mupr286g00009 756 FunFam Vesicle-fusing ATPase 104 201 - -
Mupr286g00009 756 Gene3D - 9 100 - -
Mupr286g00009 756 Gene3D - 404 495 - -
Mupr286g00009 756 SMART AAA_5 537 675 IPR003593 GO:0016887
Mupr286g00009 756 SMART AAA_5 257 404 IPR003593 GO:0016887
Mupr286g00009 756 CDD RecA-like_NSF-SEC18_r1-like 224 400 - -
Mupr286g00009 756 SUPERFAMILY Cdc48 domain 2-like 103 206 IPR029067 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr286g00009 Mupr-Chr286 74689 91675 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr286g00009 162 476 Calmodulin-binding Proteins AT3G56690 29.653 3.98e-30 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr286g00009 K06027 - gmx:100779259 1293.49