Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr286g00005 ATGGAAAAAGAAGAAGACGATGAAGGCCCACCTCCGGGATGGCAACCTATCCCCACTCAGCCACCGCCACCGCCACCGCCACGTCCATCCGGTAGGGCGCAAATGGTTTGCGGTTCTTGTCGTTGCCTGCTTTCGTATCAACGAGGTGCCAAACATGTCAAATGTTCATGCTGTCAGACTGCCAACATTGTATTAGAAGCTGATCAGGTTGGGCAAGTTAAGTGTGGCAGCTGTGCAGTATTGCTAATGTATCCATATGGTGCTTCACAAGTTAGATGTTCCTCATGCCAGTTTGTGACAGAAATTGGGGCACACAACAAGCGATCTCCATGGTCTGTACAACAAAGGAAACCAACTCCTCCCAAAACTGGTTGTTAG 378 0.4947 MEKEEDDEGPPPGWQPIPTQPPPPPPPRPSGRAQMVCGSCRCLLSYQRGAKHVKCSCCQTANIVLEADQVGQVKCGSCAVLLMYPYGASQVRCSSCQFVTEIGAHNKRSPWSVQQRKPTPPKTGC 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr286g00005 125 PANTHER PROTEIN LSD1 8 121 IPR040319 -
Mupr286g00005 125 MobiDBLite consensus disorder prediction 11 31 - -
Mupr286g00005 125 MobiDBLite consensus disorder prediction 1 33 - -
Mupr286g00005 125 Pfam LSD1 zinc finger 75 99 IPR005735 -
Mupr286g00005 125 Pfam LSD1 zinc finger 37 60 IPR005735 -
Mupr286g00005 125 NCBIfam zinc finger domain, LSD1 subclass 72 100 IPR005735 -
Mupr286g00005 125 NCBIfam zinc finger domain, LSD1 subclass 34 64 IPR005735 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Mupr286g00005 zf-LSD1 2.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr286g00005 - - gmx:100780865 205.297