Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2847g00005 ATGAGTGAAACCGCCAGTCTTCATGCACAAACAAGGACATCAATTTCTTCTTTGGATGCCATGGCTCATCACCACCCACATTACCGGTCACAGTTCGGAGACACAACATTCACCAAATTGTTCGTTGGAGGACTAGCCTGGGAGACTCCCACTGAAGAAATGCGCAAATACTTCGACCAGTTCGGGGACATTCTTGAAGCTGTCATAATCACTGACAAGAACACGGGAAAATCCAAAGGCTATGGATTCGTAACATTCTGCGATCAGGAATCAGCAAGAAGGGCATGTGCTGATCCAAACCCCATAATAGATGGAAGAAGAGCAAATTGTAATATCGCTTCTCTGGGAAGGACTCGACCATCACCACCTCGAGGGAGGAATATAGTTCAAGGTGGAGGAGGAGGAACAGCACAGGGTGTTCCGGGAGCGGGACCACCGTCACTGCCACCGCCGCCTGTTATGTACCCACCGTATGGCTATACAACCTATACTCCTGATTATGGGTACCACCACCAAGCCACATTGTACAACCCACAGGTTCAGCAACCACAATACTATCAACAACTTTATGGAGCATCATCTTCTACCATGAGCACCCCATATTACTATGGCTATTCTGTGCAAGCACCAAGAAACACATTTTCTTCACCCCAAGCAAATCGCCTATCACCTGGACCGTCCTATCTATACTACCCTACACCCATGGAAGTTTCATTCTCTGGATATCGTCCACCCCAACAATCACCAATGAGGCAATCCTTTCCTTCCCCTAATGATTCACAGAGTCAGCAGCGTACCTCCTCTGAAACAGCAACCGGGATAGCTATAACTTCAGAAAGTTCAAATACCCAAGGGAAGAACTAA 864 0.4734 MSETASLHAQTRTSISSLDAMAHHHPHYRSQFGDTTFTKLFVGGLAWETPTEEMRKYFDQFGDILEAVIITDKNTGKSKGYGFVTFCDQESARRACADPNPIIDGRRANCNIASLGRTRPSPPRGRNIVQGGGGGTAQGVPGAGPPSLPPPPVMYPPYGYTTYTPDYGYHHQATLYNPQVQQPQYYQQLYGASSSTMSTPYYYGYSVQAPRNTFSSPQANRLSPGPSYLYYPTPMEVSFSGYRPPQQSPMRQSFPSPNDSQSQQRTSSETATGIAITSESSNTQGKN 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2847g00005 287 Gene3D - 4 136 IPR012677 -
Mupr2847g00005 287 MobiDBLite consensus disorder prediction 240 287 - -
Mupr2847g00005 287 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 40 97 IPR000504 GO:0003723
Mupr2847g00005 287 SUPERFAMILY RNA-binding domain, RBD 23 135 IPR035979 GO:0003676
Mupr2847g00005 287 MobiDBLite consensus disorder prediction 115 149 - -
Mupr2847g00005 287 MobiDBLite consensus disorder prediction 239 287 - -
Mupr2847g00005 287 CDD RRM_RBM24_RBM38_like 38 113 - -
Mupr2847g00005 287 FunFam RNA-binding protein 24-B isoform X1 25 134 - -
Mupr2847g00005 287 SMART rrm1_1 39 111 IPR000504 GO:0003723
Mupr2847g00005 287 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 38 115 IPR000504 GO:0003723
Mupr2847g00005 287 PANTHER BOULE-RELATED 17 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2847g00005 Mupr-Chr2847 64288 68452 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2847g00005 34 114 C2H2 Transcription Factor Family AT2G19380 38.272 7.87e-14 69.7