Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2836g00001 ATGGGTCTTAGAGACATTGGTGCTTCGCTGCCCCCTGGGTTTCGGTTCTATCCGAGTGATGAGGAGTTGGTCCTTCATTACCTTTACAAAAAGGTCACAAATGAGGAAGTTCTGAAGGGTACCTTGATGGATATTGACTTGCACACGTGCGAGCCATGGCAGCTCCCTGTCCCATCCTTGTTTGCTCATAAACATGGTAAACTGCATATTCAAAACAATTCGGGAAATTAA 231 0.4545 MGLRDIGASLPPGFRFYPSDEELVLHYLYKKVTNEEVLKGTLMDIDLHTCEPWQLPVPSLFAHKHGKLHIQNNSGN 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2836g00001 76 ProSiteProfiles NAC domain profile. 10 76 IPR003441 GO:0003677|GO:0006355
Mupr2836g00001 76 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 59 - -
Mupr2836g00001 76 Gene3D NAC domain 19 73 IPR036093 GO:0003677|GO:0006355
Mupr2836g00001 76 Pfam No apical meristem (NAM) protein 11 62 IPR003441 GO:0003677|GO:0006355
Mupr2836g00001 76 SUPERFAMILY NAC domain 8 59 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2836g00001 Mupr-Chr2836 1710 2160 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2836g00001 1 56 NAC Transcription Factor Family AT4G28530 54.167 1.77e-19 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr2836g00001 NAM 1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2836g00001 - - gmx:100783645 120.553