Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2829g00001 ATGGCTTTAAGTTCTGAGTCCTACAAGTGGAAGTATGATGCATTCATAAGCTTTAGAGGGGATGACACCCGTGTAAATTTCACAAGCCATCTTTATGATGCTCTATGTCAAAAAGGAGTTAATACTTTCATAGACTACAAGGAGCTCAAGAGAGGAGAGAAGATTTCACCTTCACTTTCTAGAGCTATTCAAGACTCAAGGATCTCAGTTGTAATATTATCTAAAACTTACGCTTCTTCAACTTGTTGCTTAGATGAACTCCTTAAGATCCTTGAGTGTAAGGGCTCCAAAGGCCAACTGGTAAGAGAACATCAGGGAAGCTATGAAGTAGCTTTGGCCAAACATGAAGACAAGTTTAGGGATGATATGGAAAAGGTGAAAAGGTGGAGGGCAGCTCTATGTGAAGTAGCTACTTTGTCTGGGTGGCACATAGGAGATGGGCTGGACTCTAAGTTTGTCAAGAGAATTGTTGAAGAGATATTGAGTAAGCTGAACTACACACCTTTCAATGTTGCTAAACATCCTATTGGACTGGATTTGCCTATGGTAGATATTAAATCACTTTTGGAAACTGGATTAGATGATGTGCGGTATATAGGAATTTATGGAATTGGGGGAATAGGGAAATCAACGCTTGCTAAGGCTGTTTATAACCATATTGCTAATCAGTTTGAGGCAAGTGCTTTTATTGCAGACGTTAGAGAAATTTCAAGTCAAAGATTTGGCATAGTTCAACTGCAAGAAGCACTTCTTTCAGAGATCTTGAACCATGGAGATTTTAAAGTTGGAAACAAAGACAGAGGAATTAACCTGATAAAAAATAGGCTTTGTTGTAAAAAGGTTGTCATAGTTGTTGATGATGTTGATTCATTGGAGCAACTGGAATATTTGGTTGGAGAACACAATTGGTTTGGATCAGGAAGTAGAATCATCATAACAACCAGAGATGAGCATTTGCTAATTGCTCACAATGTGAAAGCAGCCTACAAGGTCAAGGAATTAAGTCATGGTCATGCTCTTGAATTGTTTAGTTGGTATGCTTTCAAAAAACCCTGTCCTCCAACAAATTATGAGGAATTGTCCTTCCACATATTAAACTATGCCAAGGGCCTGCCATTGGCACTAACAGTTTTGGGGTCTCACTTGTGTGGTAGAGACAAAGCAGAATGGATAAGTGCAATAGCTAAACTGGAAAATGTTCCAAATAAGCATATTTTTGAAGTACTTAAGATCAGCTTTGATGGGTTGGAAGAGAATGAAAAGGCCATATTTCTGGATATTGCATGTTTCTTTAAGGGAGAGGACAAACAGTATGTGAAAATGATACTAGACAGTTGTGATCTGCACTCAGATATTGGAATTGGAGTTCTAATAGATAAGTCTCTCATTACTTTAGAACTGAACAAGCTTTGGATGCATGAGTTGCTACAGGAAATGGCTAAAGAAATTATTCGTCGTGAATCTCCCAAAGAGCTTAGTAAACGTAGCAGACTCTGGTTTCATGAGGATGTTATTCATGTGTTGAACCAAAATATGGGTATTAATAACATTGAAGGAATAAGGCTAGATGTACCTGAACCAAATAAGGTTGTCATAAATGGAAAAGCATTCACAAATATGAAAAGACTTAGACTTCTTATGATGAATAATGTGCATATTTCAGATGATATTCAATATTTATCTAATGAGCTAAGATTAATTGATTGGCCGGGGTACCCTTCTTCAACTCTACCACAAAACTTCCACCCAAAGAGGCTTGTTTCTTTAAATCTGAGTCATGGTCGCATCAAAAGCCTCTGGAAGGGAGTTAAGATATTCAAAGACTTGAAACTTGTGTCCTTTAGCTGCTGTGAATACCTCACTGAAATTCCAAACTTCTCAATGATTCCAAACCTTGAGAGTCTCAGCCTAGACCATTGTAAAAGTTTAACTGAGGTGCATGAGTCTGTGGGATCTCTTGATAAGCTGGTTACTTTAGATTTCCTAATGTGCTCCAATCTCAAGACTCTTCCAAGGTTTTTCAAGTTAAAATCTCTTCGTATTCTTATCCTTACTGGCTGCTCAAAAGTTGGAAAGTTTCCTGAGATTGTTGAGAGAATGGTGCATTTTGAAGAACTCCTTCTCCAAGGGACTGCCATAAAAGAACTACCAGAGTCAATTGAACACCTAAATAGGCTGAAAGTATTACTCTTAGATTCTTGTCAAAGGCTTGAGCATCTCCCTAATAGCCTTCATAATTTGCAATGCCTTACTTCACTTGGTCTCACTGACTGTTGTAAGCTCAAAGAGCTACCAAAATTGCCACTAAATACAAGATACATAGACACAAGTAATTGTAGATCATTGGAAAGGTTACCAGCATTATCCAACTCGTCAAATTTCATTGAAGAGAATTTACCAAGGTTTTCTCGAATGATGTTCATTAACTGCAATAAACTGATTGATAAACAAGTCCAAGACCACATAACAAGTCTCTTATACAATGAGGTAGATGCTAAATGCTCACTCTATGTCTCTTTGTGTTCTTCCGTAAAAATATTAAAGAAC 2547 0.3761 MALSSESYKWKYDAFISFRGDDTRVNFTSHLYDALCQKGVNTFIDYKELKRGEKISPSLSRAIQDSRISVVILSKTYASSTCCLDELLKILECKGSKGQLVREHQGSYEVALAKHEDKFRDDMEKVKRWRAALCEVATLSGWHIGDGLDSKFVKRIVEEILSKLNYTPFNVAKHPIGLDLPMVDIKSLLETGLDDVRYIGIYGIGGIGKSTLAKAVYNHIANQFEASAFIADVREISSQRFGIVQLQEALLSEILNHGDFKVGNKDRGINLIKNRLCCKKVVIVVDDVDSLEQLEYLVGEHNWFGSGSRIIITTRDEHLLIAHNVKAAYKVKELSHGHALELFSWYAFKKPCPPTNYEELSFHILNYAKGLPLALTVLGSHLCGRDKAEWISAIAKLENVPNKHIFEVLKISFDGLEENEKAIFLDIACFFKGEDKQYVKMILDSCDLHSDIGIGVLIDKSLITLELNKLWMHELLQEMAKEIIRRESPKELSKRSRLWFHEDVIHVLNQNMGINNIEGIRLDVPEPNKVVINGKAFTNMKRLRLLMMNNVHISDDIQYLSNELRLIDWPGYPSSTLPQNFHPKRLVSLNLSHGRIKSLWKGVKIFKDLKLVSFSCCEYLTEIPNFSMIPNLESLSLDHCKSLTEVHESVGSLDKLVTLDFLMCSNLKTLPRFFKLKSLRILILTGCSKVGKFPEIVERMVHFEELLLQGTAIKELPESIEHLNRLKVLLLDSCQRLEHLPNSLHNLQCLTSLGLTDCCKLKELPKLPLNTRYIDTSNCRSLERLPALSNSSNFIEENLPRFSRMMFINCNKLIDKQVQDHITSLLYNEVDAKCSLYVSLCSSVKILKN 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2829g00001 849 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 142 IPR035897 -
Mupr2829g00001 849 Pfam NB-ARC domain 186 403 IPR002182 GO:0043531
Mupr2829g00001 849 SUPERFAMILY "Winged helix" DNA-binding domain 404 508 IPR036390 -
Mupr2829g00001 849 Gene3D - 333 417 IPR042197 -
Mupr2829g00001 849 Gene3D Ribonuclease Inhibitor 515 673 IPR032675 -
Mupr2829g00001 849 SUPERFAMILY L domain-like 486 815 - -
Mupr2829g00001 849 PRINTS Disease resistance protein signature 275 289 - -
Mupr2829g00001 849 PRINTS Disease resistance protein signature 368 382 - -
Mupr2829g00001 849 PRINTS Disease resistance protein signature 674 690 - -
Mupr2829g00001 849 PRINTS Disease resistance protein signature 198 213 - -
Mupr2829g00001 849 ProSiteProfiles TIR domain profile. 10 164 IPR000157 GO:0007165
Mupr2829g00001 849 Gene3D - 171 328 IPR027417 -
Mupr2829g00001 849 Gene3D - 4 169 IPR035897 -
Mupr2829g00001 849 Gene3D Ribonuclease Inhibitor 674 833 IPR032675 -
Mupr2829g00001 849 SMART till_3 11 139 IPR000157 GO:0007165
Mupr2829g00001 849 Pfam TIR domain 11 167 IPR000157 GO:0007165
Mupr2829g00001 849 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 427 IPR027417 -
Mupr2829g00001 849 FunFam Disease resistance protein (TIR-NBS-LRR class) 335 417 - -
Mupr2829g00001 849 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 772 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2829g00001 Mupr-Chr2829 2561 6269 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2829g00001 12 765 WRKY Transcription Factor Family AT4G12020 33.033 1.29e-107 362