Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2819g00004 ATGAAGAATTTCTCAGAGGCAGCCTCTCCTTCTTGCAGAGCCAGATCCAAGAAACCCAATCTTCCAAGCTCCAAAGTTCAATCGCCAAAGCCCATTCAAATCAGCACCAAGACGCCGGAAAAGCCGCCGCAGCGAACCCGCAGTCGCGGCGGCGTGGTGCGCTCCATTGCAGAAGTAATAAAGGTTGGCAAAGACTTGCAAGATCGGAAACAACGCAATGAAACGGCGTCGTCGCGTTCAAAGAGTGTCAGGAGACAGATCTCACTGTCGCCTTCCTCCCCCAGTAAACCCAACATCACCGATGATGGACCCTTTAAGCTTCCCGAAAAATATGAAATTTTGGATCAGTTCTTCGACCGCCTCGATACTTTGATTTCAATCCTTCATCTGAGAGGGAGGACGCCGACCTTTACGGCCATCAGTTCCGGAATTGAATCTTTGGTCGATAGGAGGTTCACTTACAGTCACTTAGCCCAGTTGAAATTTGTCTTACCTGAAGCTATTGATATTAAGAAGTTTCTGGTCCGTGATGAACGGACGTGTTGTATGAAGCACGATCTTCACATTTCTCTAAATCCCGATGCGGTGGAGTGTGACGCAAAACAACGTGGTAAAGTTTCGCTGAAGAGTGGTAAAGTTTCGCTGAAGAGTGGTAAAGTTTCGCTGAAGAGTGGTAAAGTTTCGCTGAAGAAGTTGTTTCGCTCGCGGTTAAAAGAGTTTTGGGAATCTCATCCTGAGGGTGATGAAATTCCAGAAGAAACATTGCCGGAGCCTTTCAATCACCTAAAGAATGACAGTATTCTGGACAAGTTGAAAACTAGTCCTCCAACAAAATTGCCATCATGCATGCCCTATACTGACATTGTCAATAATGTAGAGTCTGCTGACACAGTTGAAAAATTGTCAGTACCTGTCAACACATCAGTTGAATCGCCTAGTGTGAATATGGCACCGCCTTCTCACATGCTATCATCCTTTAGACCGCGATTTTCTCAGAAATTTAAGCAGAACGAAGTAGATGTTGTGCAGCAAAAGTCTCCGGTAGATTCATTACAACCCCTGACATATACAGATTCAGAGTCAAGCACAAAGGAAATTCCTAGCTCTGAGGATGCTAAAGTTGACACATCTCTGGAATCATCTGGTGCTCCCCCTGCTACTCCAAGCAAAACCATTGAGTATGCAGAAAACCAAGATGCTTCTTTCAAGAGTGAAGCCATGTCAACCCCGGCTAAACTTGCTTCAACTCCAATTAGGTTGATGAGTGCAACACCTGCGTTGCGTCCAACCAAAAGAAATTGTATGAGTCCAGAGGACAACACTACCAGTTCTTTGAACAAGTTAGCTAGGCGTCCACCTCGCTCGAGGTCATTGAAGTTTGACACTCCAGTGAAGAATAAGGAGGTTGTGAATGAAGACAATGCTGGTGGCTTACGATTAGATGATGATGTTTTTGACGTCCTCCCTGAAAATCTTATCCAATCGATTAGAGAAAAGGAAAGAATGGCAACGGAGGAAAGAGACCCAGCTATTTCACAGGCAAAGAAACGGAAAAAAAATATAGCTAGCCTCCCTAAGCTCTTTGACAGAATTCGCCTCTTGCTTCGACAGAGGTCTTGTATTACTAAAGCGGAGCTTATAAGCAAGATAATATCAAGCTGCTGTGATATTGTTGACAGAAATGAAGTCGATGAGCAGCTAAATTTGTTGCTAGAACTAGCACCGGAATGGATTTATGAGAAGCTGGTCTCCAGTGGGGATTTGCTATTATTCATAAATAAAATGTTGAATCCTGAAACCATTCGGGCATCTCTTGGAGAAGCCAAGTGA 1830 0.4443 MKNFSEAASPSCRARSKKPNLPSSKVQSPKPIQISTKTPEKPPQRTRSRGGVVRSIAEVIKVGKDLQDRKQRNETASSRSKSVRRQISLSPSSPSKPNITDDGPFKLPEKYEILDQFFDRLDTLISILHLRGRTPTFTAISSGIESLVDRRFTYSHLAQLKFVLPEAIDIKKFLVRDERTCCMKHDLHISLNPDAVECDAKQRGKVSLKSGKVSLKSGKVSLKSGKVSLKKLFRSRLKEFWESHPEGDEIPEETLPEPFNHLKNDSILDKLKTSPPTKLPSCMPYTDIVNNVESADTVEKLSVPVNTSVESPSVNMAPPSHMLSSFRPRFSQKFKQNEVDVVQQKSPVDSLQPLTYTDSESSTKEIPSSEDAKVDTSLESSGAPPATPSKTIEYAENQDASFKSEAMSTPAKLASTPIRLMSATPALRPTKRNCMSPEDNTTSSLNKLARRPPRSRSLKFDTPVKNKEVVNEDNAGGLRLDDDVFDVLPENLIQSIREKERMATEERDPAISQAKKRKKNIASLPKLFDRIRLLLRQRSCITKAELISKIISSCCDIVDRNEVDEQLNLLLELAPEWIYEKLVSSGDLLLFINKMLNPETIRASLGEAK 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2819g00004 609 CDD Cdt1_c 488 605 IPR032054 -
Mupr2819g00004 609 CDD Cdt1_m 104 281 IPR014939 -
Mupr2819g00004 609 PANTHER DNA REPLICATION FACTOR CDT1 10 608 IPR045173 GO:0003677|GO:0030174|GO:0071163
Mupr2819g00004 609 MobiDBLite consensus disorder prediction 429 459 - -
Mupr2819g00004 609 MobiDBLite consensus disorder prediction 61 79 - -
Mupr2819g00004 609 MobiDBLite consensus disorder prediction 373 390 - -
Mupr2819g00004 609 MobiDBLite consensus disorder prediction 1 41 - -
Mupr2819g00004 609 FunFam CDT1-like protein a chloroplastic 481 609 - -
Mupr2819g00004 609 Pfam DNA replication factor CDT1 like 107 172 IPR014939 -
Mupr2819g00004 609 Gene3D - 482 609 IPR038090 -
Mupr2819g00004 609 SMART CDT1_2 107 257 IPR014939 -
Mupr2819g00004 609 MobiDBLite consensus disorder prediction 434 450 - -
Mupr2819g00004 609 Pfam DNA replication factor Cdt1 C-terminal domain 491 581 IPR032054 -
Mupr2819g00004 609 SUPERFAMILY "Winged helix" DNA-binding domain 104 259 IPR036390 -
Mupr2819g00004 609 MobiDBLite consensus disorder prediction 342 390 - -
Mupr2819g00004 609 MobiDBLite consensus disorder prediction 80 99 - -
Mupr2819g00004 609 MobiDBLite consensus disorder prediction 1 104 - -
Mupr2819g00004 609 MobiDBLite consensus disorder prediction 342 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2819g00004 Mupr-Chr2819 12336 15098 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2819g00004 22 607 Core DNA Replication Machinery Family AT2G31270 37.134 1.09e-84 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2819g00004 K10727 - gmx:100778818 696.041