Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2814g00011 ATGCGGCCTCTTGGTAGCCCGACACCTCTCCCCTCAGTCAAAAGAAAAAGACAAAAGGGAATGGATGTAATTCCCGAAATACCCCTCCGATCTGGGAGCCTGCGTGTCGCAAAGCAAAGAGAGAGGGACCTTCACCTCCTTCTTCCTCTTCCTCTTCTCATCCTTCTCTCGTCCATGGAGCTTCAGAGACGACCAGATCAGTGCCTCCCAGAGAGGAAAGGGCAGAAGAGGAAGCTTGAGGAGGAATTCGAAGAGGACCGACAACAGATCTCCACGCCTCCCACCGGCGACGCTCGTGACGCCATCCTTTCCGACGTTAAGGAACAAGTTTCCGTCCTCGATTTCACTTTCTCATGGAAGGAATCCGATCGCGCTGCCGCCAAGCGCGCTACGCACGCCCTCGCCGATCTCGCCAAAAACGAGGAAGTCGTGAACGTGATTGTTGAAGGAGGCGCCATTCCGGCTTTGGTTATGCATCTTCAAGCGCCTCCTCTTTCTGAAACCGACCGTGTGCAGAGGCCAATGCCGTTTGAGCATGAGGTCGAGAAAGGAAGTGCGTTCGCGCTTGGACTTCTCGCCGTCAAGCCAGAGCATCAACAACTCATTGTTGACAGTGGTGCCTTAAAACATCTTGTCGATCTTTTGAAGAGGCATAAGAATGGCTTAACATCTCGAGCCATTAATAGTCTCATTCGTAGGGCTGCAGATGCTATCACTAATCTTGCTCATGAGAACAGCAGCATTAAGACCCGAGTCAGGATGGAAGGTGGGATTCCACCACTTGTTCATTTGCTTGAATTTGCGGATACAAAGGTGCAAAGAGCAGCTGCTGGTGCATTGCGAACCCTTGCTTTCAAAAATGATGAAAATAAAAATCAGATCGTTGAATGCAATGCCCTTCCAACTCTGATTCTAATGCTTCGTTCAGAAGATGCTGCTATTCATTATGAAGCGGTTGGTGTTATTGGAAATCTGGTCCACTCTTCCCCTAATATAAAGAAAGAAGTTCTTCTTGCTGGAGCCTTACAACCTGTTATTGGCTTACTTAGCTCCTGTTGCTCTGAAAGCCAGAGGGAAGCAGCCTTATTACTTGGACAATTTGCAGCAACTGATTCAGACTGCAAGGTTCACATTGTTCAGAGAGGTGCTGTCCGACCTCTGATAGAGATGCTTCAGTCCCCTGATGTTCAGCTAAAAGAAATGTCTGCCTTTGCATTGGGGAGATTGGCCCAGGATGCACATAACCAAGCTGGTATTGCGCACAATGGTGGCTTGATGCCATTACTAAAGCTTCTTGACTCGAAAAATGGGTCTTTGCAACATAATGCTGCTTTTGCTCTCTATGGCCTTGCAGATAATGAGGATAATGTGTCCGATTTTATTAGGGTAGGTGGAATTCAGAGACTACAGGATGGAGAGTTTATTGTTCAAGCAACTAAAGATTGTGTTGCAAAGACATTGAAAAGATTAGAAGAGAAGATTCATGGCCGAGTGCTGAACCATTTGTTATATCTCATGCGAGTTTCAGAAAAGGCTTTTCAAAGACGGGTTGCTTTGGCTCTTGCTCACCTTTGTTCTGCAGATGATCAGAGAAAAATATTTATTGATCACCATGGTTTGGAGTTGCTTATAGGGCTTCTTGGCTCTTATAACTCGAAGCAACAGCTTGATGGAGCTGTGGCTTTATGCAAGTTGGCCAATAAAGCTACGACTCTGTCTCCTGTAGATGCTGCACCCCCATCTCCAACGCCCCAGGTCTATTTGGGAGAGCAGTATGTGAACAATGCTACCTTGTCTGATGTTACATTTTTGGTTGAAGGCAAACGGTTTTATGCTCACAGAATCTGCCTGCTTGCATCTTCAGACGCATTTCGTGCTATGTTTGATGGTGGTTATAGGGAGAAGGAGGCACGGGACATAGAGATTCCAAACATTAGATGGGAGGTTTTTGAGCTGATGATGAGATTTATATACACTGGATCAGTCGATGTTACTCTTGATATTGCCCAAGATCTCCTCCGAGCAGCTGATCAATATCTTTTAGAAGGACTCAAGAGACTCTGCGAGTACACAATTGCACAGGATATATCACTGGAGAATGTATCAAGTATGTATGAACTTTCAGAAGCCTTTAATGCTATATCGTTGAGGCACACATGCATCCTTTTTATCTTGGAGCACTTTGATAAATTGAGTGGAAAGCCAGGACACTCTCATCTGATTCAGCGCATAATACCCGAGATCCAGAATTACTTTGTTAAAGCTCTTACGAAGGCCAATTCCAATATCCAGCTAACTTCTGGTGACTTTTCCATGGGCAGATGGAAGAAGGCCTATAGTGGGAAAAGGCTTTTATCTTGGCCCCATGCATTACCATTCGTCGTACCTGAGGAAAGAGATTCCAAACGGTCTACTTCACTTGGAATTGGCTCA 2433 0.4587 MRPLGSPTPLPSVKRKRQKGMDVIPEIPLRSGSLRVAKQRERDLHLLLPLPLLILLSSMELQRRPDQCLPERKGQKRKLEEEFEEDRQQISTPPTGDARDAILSDVKEQVSVLDFTFSWKESDRAAAKRATHALADLAKNEEVVNVIVEGGAIPALVMHLQAPPLSETDRVQRPMPFEHEVEKGSAFALGLLAVKPEHQQLIVDSGALKHLVDLLKRHKNGLTSRAINSLIRRAADAITNLAHENSSIKTRVRMEGGIPPLVHLLEFADTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLKEMSAFALGRLAQDAHNQAGIAHNGGLMPLLKLLDSKNGSLQHNAAFALYGLADNEDNVSDFIRVGGIQRLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVSEKAFQRRVALALAHLCSADDQRKIFIDHHGLELLIGLLGSYNSKQQLDGAVALCKLANKATTLSPVDAAPPSPTPQVYLGEQYVNNATLSDVTFLVEGKRFYAHRICLLASSDAFRAMFDGGYREKEARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFNAISLRHTCILFILEHFDKLSGKPGHSHLIQRIIPEIQNYFVKALTKANSNIQLTSGDFSMGRWKKAYSGKRLLSWPHALPFVVPEERDSKRSTSLGIGS 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2814g00011 811 SUPERFAMILY ARM repeat 497 568 IPR016024 -
Mupr2814g00011 811 Gene3D - 355 572 IPR011989 -
Mupr2814g00011 811 MobiDBLite consensus disorder prediction 66 88 - -
Mupr2814g00011 811 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 206 256 IPR000225 GO:0005515
Mupr2814g00011 811 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 382 424 IPR000225 GO:0005515
Mupr2814g00011 811 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 423 465 IPR000225 GO:0005515
Mupr2814g00011 811 SUPERFAMILY ARM repeat 126 469 IPR016024 -
Mupr2814g00011 811 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 298 340 IPR000225 GO:0005515
Mupr2814g00011 811 Gene3D - 101 227 IPR011989 -
Mupr2814g00011 811 Gene3D - 228 354 IPR011989 -
Mupr2814g00011 811 SMART arm_5 412 452 IPR000225 GO:0005515
Mupr2814g00011 811 SMART arm_5 195 243 IPR000225 GO:0005515
Mupr2814g00011 811 SMART arm_5 329 369 IPR000225 GO:0005515
Mupr2814g00011 811 SMART arm_5 140 194 IPR000225 GO:0005515
Mupr2814g00011 811 SMART arm_5 287 327 IPR000225 GO:0005515
Mupr2814g00011 811 SMART arm_5 245 285 IPR000225 GO:0005515
Mupr2814g00011 811 SMART arm_5 527 567 IPR000225 GO:0005515
Mupr2814g00011 811 SMART arm_5 371 411 IPR000225 GO:0005515
Mupr2814g00011 811 ProSiteProfiles BTB domain profile. 599 666 IPR000210 GO:0005515
Mupr2814g00011 811 Gene3D Potassium Channel Kv1.1; Chain A 579 728 IPR011333 -
Mupr2814g00011 811 CDD BTB_POZ_ARIA_plant 586 701 - -
Mupr2814g00011 811 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 59 763 IPR044282 -
Mupr2814g00011 811 SMART BTB_4 599 696 IPR000210 GO:0005515
Mupr2814g00011 811 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 256 291 IPR000225 GO:0005515
Mupr2814g00011 811 MobiDBLite consensus disorder prediction 66 99 - -
Mupr2814g00011 811 Pfam Armadillo/beta-catenin-like repeat 371 410 IPR000225 GO:0005515
Mupr2814g00011 811 Pfam Armadillo/beta-catenin-like repeat 287 326 IPR000225 GO:0005515
Mupr2814g00011 811 Pfam Armadillo/beta-catenin-like repeat 252 284 IPR000225 GO:0005515
Mupr2814g00011 811 SUPERFAMILY POZ domain 591 693 IPR011333 -
Mupr2814g00011 811 FunFam Armadillo/beta-catenin repeat family protein 590 734 - -
Mupr2814g00011 811 Pfam BTB/POZ domain 592 694 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2814g00011 Mupr-Chr2814 46682 54944 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2814g00011 355 466 U-box Gene Family AT3G46510 28.571 2.35e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mupr2814g00011 BTB 6.1e-26 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2814g00011 - - gmx:100819832 1302.35