Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2813g00005 ATGGGGAAGACACGTGGAATGGGAGCTGCCCGCAAGCTGAAGTCACACCGTAGGAGACAAAGGTGGGCTGACAAGTCATACAAAAAGTCTCATCTTGGCAATGAATGGAAGAAGCCTTTTGCTGGTTCATCCCATGCAAAGGGAATTGTTCTTGAAAAGATAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCTAGGGTTCAACTCATCAAAAATGGGAAGAAGATTGCTGCATTTGTACCAAATGACGGTTGTTTAAATTACATTGAAGAGAATGATGAAGTCTTGATAGCTGGATTTGGACGAAAAGGTCATGCCGTGGGTGATATTCCTGGTGTCAGATTCAAGGTTGTGAAGGTTTCTGGTGTGTCTCTCCTGGCTCTTTTCAAGGAAAAGAAAGAGAAGCCGAGAATACACTAG 432 0.4421 MGKTRGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRIH 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2813g00005 143 Gene3D - 25 142 IPR012340 -
Mupr2813g00005 143 SUPERFAMILY Nucleic acid-binding proteins 20 141 IPR012340 -
Mupr2813g00005 143 CDD Ribosomal_S23 26 139 IPR005680 GO:0003735|GO:0006412|GO:0015935
Mupr2813g00005 143 ProSitePatterns Ribosomal protein S12 signature. 59 66 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mupr2813g00005 143 MobiDBLite consensus disorder prediction 9 25 - -
Mupr2813g00005 143 NCBIfam 30S ribosomal protein S12 6 141 IPR005680 GO:0003735|GO:0006412|GO:0015935
Mupr2813g00005 143 FunFam 40S ribosomal protein S23 25 142 - -
Mupr2813g00005 143 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 1 141 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mupr2813g00005 143 MobiDBLite consensus disorder prediction 1 30 - -
Mupr2813g00005 143 Pfam Ribosomal protein S12/S23 31 141 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mupr2813g00005 143 PIRSF RPS12p_RPS12a_RPS23e_RPS12o 16 143 IPR006032 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2813g00005 Mupr-Chr2813 58931 60700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2813g00005 1 141 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 95.745 1.40e-95 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2813g00005 K02973 - fve:101294077 285.419