Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2813g00003 ATGGGGAGTGTTTGGTGTTTACCCGTACAAGGCCCAATACACCAGTTCTGGGCTTTTGGCAGCGGATTTATTTATTTCCTCATTTTTCCCGCCAAGAAAAGAAGTTTTAGTGGAAAGAAAAAGGCAGCGACGGACGTCGTCGGAAAAGGGATGCACGGAACACCAGAAGAAGAGACTGAGCAGAGGATCGGATACGGGTTCGGATCCGTATCCATGGACTCATTCGGGTTAATGGATATTCTTGGCACTTACTTTCCTCAGCAACTCTTCACCGTCGAAGAAACCTGGCTCAATCTCACTTCTGCTCTTCTTTCCTTCTTCTCCTCACCGCCGGGACAAAATCTCGCTCCTCAGGTGAAAAACGATCATGGAAACTATGTCTTGTCACTTGACTTTCAGCAGTTCAAACAAATATGTCACGTTGAGGAATTTTATGAAATGTTAATGGAGAAACCTAAAATTGCTCTCTTATGCATGAGTGCTGCTGTTCATAAGGTTTTGCTTTCCAAATGGGAGAATGACAATCTGGAGCTTGGTGCGAAGGTAGATATTCGTCTTCATAACTGTCCTGAAACTATGATTGCTCTGAAGAACTTAAAAGCAGCTTACATTGACAAACTTGTCTCAGTTCGTGGTACTGCTGTGAAAGTCAGCACTGTCAGGCCTCTGGTGGTGGAAATGAGTTTTGAATGTAGTAAATGTAAACAAACAATTACACGTATATTTCCTGATGGAAAATATTCTCCACCATCTACTTGCAATTTGAATGGCTGCAAGAGCAAAATCTTTAATCCGTTGCGATCTACTGCCCAAACTATTGATTTTCAAAAAATAAGAGTTCAAGAATTATTAAAACCTGAAGACCATGAAGAAGGACGAGTGCCTCGAACAGTGGAATGTGAGCTTACCCAAGATCTTGTTGATGCATGCATACCTGGAGATGTGGTGACTGTTACTGGAATTATAAGAGGAATTAACACTTACATGGATATTGGAGGAGGGAAGTCAAAGAACAGAAACCAAGGATTTTACTATTTGTATCTTGAAGCTGTATCCATAAAAAATTCAAAGTCACAGTCCATACCTGAGGATCTACAGGACTCTAACCCCAAAGCTAGGCCAACTGAGCTGTTTGATTTGTTTTCATTTTCTTCGAAGGATTTAGAATTTGTTGTGAAGTTTGCGCAGGAGCATGGTTCAGATTTATTTAGGCAAATCCTTCAATCTATATGCCCATCCATCTATGGGCATGAGCTTGTTAAAGCTGGAATAACTTTGGCATTATTTGGTGGTGTACGAAAGCATTCTATGGATCAGAATAAGGTTCCTGTGAGGGGAGATATTCATGTCATAATTGTAGGTGATCCTGGTCTAGGTAAGAGCCAGTTGCTACAAGCAGCAGCAGCTGTTTCTCCACGTGGTATATATGTCTGTGGTAATGCCACAACCAGAGCTGGCCTCACAGTAGCTGTAGTGAAGGATCCTATGACAAGTGACTATGCTTTTGAGGCAGGTGCTATGGTGCTGGCTGACAGTGGATTGTGCTGTATTGATGAGTTTGATAAAATGTCATCAGAGCATCAGGCTTTATTGGAGGCGATGGAGCAACAATGTGTCTCTATTGCAAAGGCAGGATTAGTAGCAAGTTTATCGTCCAGGACTTCTGTCTTGGCGGCTGCAAACCCCGTTGGTGGTCATTATAACCGAGCAAAAACTGTAAATGAAAATTTGAAAATGAGTGCTGCTCTCCTGTCTCGTTTTGATTTAATTTTCATACTGCTGGACAAACCTGATGAACTTCTGGACAAGCGACTCTCGGAGCACATTATGGCACTTCATGCTGGGAATGGACAACATTCGCCGGCATTGAAAAAGAGACGTGGAGATCCATCTGATTCCAGAGCTGCTGTATCACAGAATGCCGAAGGTGTAGATCTGGGCGATGGATCTGGATCTTTAATCTCAAGGTTGAGACTTGACTCACTAAGAGACAGTGATTTTGTTCCGTTACCGGGTCAACTTCTTCGCAAATACATTGCTTATGCAAGGAGTTTTGTCTTTCCTAGGATGACCAAGCCAGCAGCAGAAATCTTGCAAAAGTTTTACCTGAAACTAAGAGATCATAATACTTCAGCTGACGGTACTCCCATCACAGCTAGGCAGCTGGAAAGTCTAGTAAGACTAGCTGAAGCTCGGGCTCGGCTGGACTTGAGAGTAGAAATAACGGCCCAGGATGCAACGGATGTTGTTGAAATCATGAAGGAATCCCTGTATGATAAATATGTTGATGAGCATGGTGTCGTGGATTTTGGTCGAAGTGGGGGGATGAGTCAACAGAAAGAGGCAAAACGCTTTCTAAATGCCCTCAACAAGCAATCGGAACTAGAACAGAAAGATTGCTTTTCAGTATCTGAAATTTACAGTCTGGCAGACAGAATTTCTTTGAAAGTTCCTGATATTGACACTTTCATCGATAATTTAAACAGCGTTGGTTATCTGCTAAAAAAAGGACCGAAGACATACCAGGTGTTATCCTCTTCTTACGCACGAAGCCAACCGTTTAGGACAAGGGGCTGA 2577 0.4265 MGSVWCLPVQGPIHQFWAFGSGFIYFLIFPAKKRSFSGKKKAATDVVGKGMHGTPEEETEQRIGYGFGSVSMDSFGLMDILGTYFPQQLFTVEETWLNLTSALLSFFSSPPGQNLAPQVKNDHGNYVLSLDFQQFKQICHVEEFYEMLMEKPKIALLCMSAAVHKVLLSKWENDNLELGAKVDIRLHNCPETMIALKNLKAAYIDKLVSVRGTAVKVSTVRPLVVEMSFECSKCKQTITRIFPDGKYSPPSTCNLNGCKSKIFNPLRSTAQTIDFQKIRVQELLKPEDHEEGRVPRTVECELTQDLVDACIPGDVVTVTGIIRGINTYMDIGGGKSKNRNQGFYYLYLEAVSIKNSKSQSIPEDLQDSNPKARPTELFDLFSFSSKDLEFVVKFAQEHGSDLFRQILQSICPSIYGHELVKAGITLALFGGVRKHSMDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTRAGLTVAVVKDPMTSDYAFEAGAMVLADSGLCCIDEFDKMSSEHQALLEAMEQQCVSIAKAGLVASLSSRTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLIFILLDKPDELLDKRLSEHIMALHAGNGQHSPALKKRRGDPSDSRAAVSQNAEGVDLGDGSGSLISRLRLDSLRDSDFVPLPGQLLRKYIAYARSFVFPRMTKPAAEILQKFYLKLRDHNTSADGTPITARQLESLVRLAEARARLDLRVEITAQDATDVVEIMKESLYDKYVDEHGVVDFGRSGGMSQQKEAKRFLNALNKQSELEQKDCFSVSEIYSLADRISLKVPDIDTFIDNLNSVGYLLKKGPKTYQVLSSSYARSQPFRTRG 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2813g00003 858 Gene3D - 223 273 - -
Mupr2813g00003 858 CDD MCM8_WHD 779 844 - -
Mupr2813g00003 858 Gene3D - 196 325 IPR012340 -
Mupr2813g00003 858 SMART AAA_5 446 598 IPR003593 GO:0016887
Mupr2813g00003 858 Pfam MCM P-loop domain 400 613 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mupr2813g00003 858 Pfam MCM OB domain 196 324 IPR033762 -
Mupr2813g00003 858 FunFam DNA helicase MCM8 isoform X1 223 274 - -
Mupr2813g00003 858 Pfam MCM AAA-lid domain 674 757 IPR041562 -
Mupr2813g00003 858 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 412 763 IPR027417 -
Mupr2813g00003 858 Gene3D - 380 767 IPR027417 -
Mupr2813g00003 858 Coils Coil 517 537 - -
Mupr2813g00003 858 SMART mcm 192 758 IPR031327 GO:0003677|GO:0005524|GO:0032508
Mupr2813g00003 858 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 126 795 IPR031327 GO:0003677|GO:0005524|GO:0032508
Mupr2813g00003 858 SUPERFAMILY Nucleic acid-binding proteins 123 326 IPR012340 -
Mupr2813g00003 858 PRINTS Mini-chromosome maintenance (MCM) protein family signature 556 568 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mupr2813g00003 858 PRINTS Mini-chromosome maintenance (MCM) protein family signature 505 519 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mupr2813g00003 858 PRINTS Mini-chromosome maintenance (MCM) protein family signature 445 460 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mupr2813g00003 858 PRINTS Mini-chromosome maintenance (MCM) protein family signature 532 545 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mupr2813g00003 858 PRINTS Mini-chromosome maintenance (MCM) protein family signature 583 591 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mupr2813g00003 858 CDD MCM8 406 756 - -
Mupr2813g00003 858 MobiDBLite consensus disorder prediction 616 644 - -
Mupr2813g00003 858 ProSiteProfiles MCM family domain profile. 402 609 IPR001208 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2813g00003 Mupr-Chr2813 38716 49530 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2813g00003 69 844 Core DNA Replication Machinery Family AT3G09660 72.494 0.0 1169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2813g00003 K10737 - gmx:100784549 1431.77