Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2813g00002 ATGGCGGAGTGTCCGGCGAGCCCCGGTGGTGGAAGCCACGAGAGCGGCGAGCACAGCCCTCGCTCTAACGTGCGCGAGCAGGACAGGTACCTTCCCATCGCTAACATAAGCCGCATCATGAAGAAGGCGCTCCCTGCGAATGGTAAAATCGCGAAGGACGCCAAAGAGACCGTTCAGGAATGCGTCTCCGAGTTCATCAGCTTCATCACCAGCGAGGCCTCTGATAAGTGTCAGAGAGAGAAGAGAAAGACTATTAACGGTGATGATTTGCTCTGGGCGATGGCCACTCTCGGTTTCGAGGATTATATCGATCCTCTTAAAATTTACCTCACCAGATACAGAGAGGGTGATACCAAGGGCTCGGCCAAGGGTGGAGAAACATCTGCTAAGAAAGATGTTCAACCAAGTCCTAATGCTCAGCTTGCTCATCAAGGTTCTTTCTCACAGAATGTTAGTTACACAAATTCTCAGGGTCAACATATGATGGTTCCAATGCAAGGCCCAGATAAT 510 0.5078 MAECPASPGGGSHESGEHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREGDTKGSAKGGETSAKKDVQPSPNAQLAHQGSFSQNVSYTNSQGQHMMVPMQGPDN 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2813g00002 170 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
Mupr2813g00002 170 Gene3D Histone, subunit A 16 159 IPR009072 GO:0046982
Mupr2813g00002 170 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 16 152 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mupr2813g00002 170 SUPERFAMILY Histone-fold 27 138 IPR009072 GO:0046982
Mupr2813g00002 170 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mupr2813g00002 170 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Mupr2813g00002 170 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Mupr2813g00002 170 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Mupr2813g00002 170 FunFam Nuclear transcription factor Y subunit B-3 19 144 - -
Mupr2813g00002 170 MobiDBLite consensus disorder prediction 1 28 - -
Mupr2813g00002 170 MobiDBLite consensus disorder prediction 117 170 - -
Mupr2813g00002 170 MobiDBLite consensus disorder prediction 131 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2813g00002 Mupr-Chr2813 31946 37005 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2813g00002 1 169 CCAAT-HAP3 Transcription Factor Family AT2G37060 76.536 3.40e-86 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mupr2813g00002 CBFD_NFYB_HMF 1.1e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2813g00002 K08065 - gmx:100820170 315.849