Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2812g00002 ATGGATAGGAATAATCTGTATAAGCCTCTGAGAGAAAATTTTAGGAGATTCAAGGTAGGTGAATGGCTATATCCGTTTAGATTCTACCTAGAAGTCTCTTGCAGGGAAATGCAATTTGCATCCACAGGGGACGATCCAGTTACAGAAAGCTCCTGGTGCATGGATACTACTACTCTGTTGAAGGGAAGAATGGCCAAACCACCTTTGTTTTGCTTGGTGGGTAGAAGAGACAACCCTGCTGCACTTCTAATGTGGATTATGATTTCGCTCTCAAATATCAATATCCTAGTCCCATGGATTAGTGTTAATGTTCTTTTTGGAATTCTTGGAGGAGTCAATGCACAATTGCATTTGAAGGTTGGAGTGTCTATTGATTGGCTCCAGTATAGTTGGATTTGGTTCTGGGAGTTCTTCAAGGATTCAAGTGATCATTCAATGCTATTGGTTTCTGTTTACTGCTGGAGGCTGTCAAGTAGCCCAGTGCTACCCTGTACTTGTACCATGGGAGAGGTGGCAGTAATGTACTCTGAGCCTTTGCAGTTTGAGTGCAATGACATTAAAGATATGGCTGAGAAGGAAGTGTATCCTCCAGAATCAAATGTGGAGCACTTACCTGGAGAAGAATCGAGTCAATCAACAGACCACAAAAATATTAATGACTTGCGAGAGAAGGGATATACGGAGTATGGATGTCAACATTACCGGAGAAGATGCCGTATCAGAGCCCCCTGTTGCAATGAAATTTTTGATTGCCGCCATTGTCACAACGAGGCAAAAAATGATATCAACATTGATCAGAACCATAGGCATGACATTCCCCGACACCAAGTCAAACAGCTAAATTTTTCTTCTACTGATTTTAACTGCTTCCAGGTTCAGCAAAACTGTATAAATTGTGGTGTTTGCATGGGCAAGTACTTCTGTGGAACATGCAAGCTTTTTGATGATGATATCTCTAAGCAGCAGTACCATTGCAATGGCTGTGGAATTTGCAGAACTGGAGGAGGCGAGAATTTCTTCCATTGCTACAAGTGTGGTTGTTGCTACCCAACTCTGTTGAAGAACAGTCACCCTTGCGTAGAAGGAGCATTGCATCATGATTGCCCTGTTTGTTTTGAGTATTTGTTTGAATCAAGAAATGATGTCACTATTATGCCATGTGGACATACAATCCATCAGAGCTGCCTGAAGGAAATGATAGAACATTTCCAGTATGCGTGCCCTCTCTGCTCGAAGTCAGTTTGTGATATGTCAAAGGTCTGGGAGAAATTTGACATAGAGATTGCTGCTACACCAATGCCTGAGCCATATCAAAATAAAATGGTTTGGATCCTGTGCAATGATTGTAGTAAAACTTCTCACGTTCAGTTCCATTTTGTGGCTCAAAAATGCCCGAACTGCAAATCCTACAACACACGACAAACTAGAGGCTGA 1434 0.4191 MDRNNLYKPLRENFRRFKVGEWLYPFRFYLEVSCREMQFASTGDDPVTESSWCMDTTTLLKGRMAKPPLFCLVGRRDNPAALLMWIMISLSNINILVPWISVNVLFGILGGVNAQLHLKVGVSIDWLQYSWIWFWEFFKDSSDHSMLLVSVYCWRLSSSPVLPCTCTMGEVAVMYSEPLQFECNDIKDMAEKEVYPPESNVEHLPGEESSQSTDHKNINDLREKGYTEYGCQHYRRRCRIRAPCCNEIFDCRHCHNEAKNDINIDQNHRHDIPRHQVKQLNFSSTDFNCFQVQQNCINCGVCMGKYFCGTCKLFDDDISKQQYHCNGCGICRTGGGENFFHCYKCGCCYPTLLKNSHPCVEGALHHDCPVCFEYLFESRNDVTIMPCGHTIHQSCLKEMIEHFQYACPLCSKSVCDMSKVWEKFDIEIAATPMPEPYQNKMVWILCNDCSKTSHVQFHFVAQKCPNCKSYNTRQTRG 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2812g00002 477 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 363 413 IPR013083 -
Mupr2812g00002 477 SMART ring_2 368 410 IPR001841 -
Mupr2812g00002 477 Pfam Ring finger domain 367 410 IPR001841 -
Mupr2812g00002 477 ProSiteProfiles Zinc finger CHY-type profile. 224 301 IPR008913 GO:0008270
Mupr2812g00002 477 Gene3D - 439 477 - -
Mupr2812g00002 477 CDD RING-H2_Pirh2-like 367 411 - -
Mupr2812g00002 477 Pfam Zinc-ribbon 415 473 IPR039512 -
Mupr2812g00002 477 SUPERFAMILY CHY zinc finger-like 227 302 IPR037274 GO:0008270
Mupr2812g00002 477 Pfam CHY zinc finger 231 313 IPR008913 GO:0008270
Mupr2812g00002 477 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 210 476 - -
Mupr2812g00002 477 SUPERFAMILY RING/U-box 367 416 - -
Mupr2812g00002 477 MobiDBLite consensus disorder prediction 197 217 - -
Mupr2812g00002 477 ProSiteProfiles Zinc finger RING-type profile. 368 411 IPR001841 -
Mupr2812g00002 477 ProSiteProfiles Zinc finger CTCHY-type profile. 303 367 IPR017921 -
Mupr2812g00002 477 SUPERFAMILY Zinc hairpin stack 304 361 IPR037275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2812g00002 Mupr-Chr2812 16163 20890 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2812g00002 229 473 C2H2 Transcription Factor Family AT3G18290 39.370 2.43e-51 186