Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2804g00003 ATGTCCCAAGATTATCAGTTCAGCTTCTCGAATGGGTTGGAGAGAGGGAGGGTGAGTCCGCAGCAGCAGATCCGGAGGGAGAAAGTGAGGTTGCAAGGAGGATTCGAGGCGGCGGCGGCACCATTGGTTGGGATAGAGGAAGAGGAACCGGTGTACGAATCCGCCGGGATGTTGTCGGAGATGTTCAATTTCCCTCCCGCGGCCGAATTGGTGGAGCAGCAGCCCGTGACGGCGGCGAGGCAAGCCGGGGACTGGTACGGCAACAGGCAACAGATGATAAGTGGTTTGGGAGATTCCAAGAGACAAAACGGAGTGAATAATGGCCGAGAGGGTTTTCACCAACATCAGATATCAAGCATTAATGCTGAGTCAGCAGCTGCCATGCAGCTTTTTCTAATGAACCCTCAAACCAGGTCGCCTTCCCCTCCTCAAAACCACGCTACTCCTTCCTCCACTCTCCACATGTTGCTTCCAAATCCTTCTTCTAATTCCCTCCAAGGTTTTACTAGTTCCGCCGTGGGAGGCTCTTTTGGTCAATTCGCCTGGCTTCCTGAGACCGCTCATCATCAAGGAGGCGTGGTGGAAGGCCAAGGTCTTTCGTTATCGTTGTCGTCTTCGCTAGAAGCAGCCAAAGCCGAGGAATTGAGGATGGGGGATAGTGGTTTTCTATATTTTAATCAACAGCAAGGAGGAGGAGGAGGAGGAGGTGCTTCTTCTTCTTCGTATCTGTACAAGAATAATCATCAGCAGGCATTGCATTTACATGGGGCGATGGGACACGACAACAACCACCAGGGACATGTTGGGTTTGGTTCATCGTCTTTGGGTGTAGTTAATGTTCTGAGAAATTCAAAGTATGTGAAGGCTGCCCAAGAGTTGCTTGAAGAGTTTTGCAGCGTTGGAAGGGGTCAGTTTAAGAAGAGCAAGTTCAATGGGCAGAATTCAAACCCTAATTCAAATCCCGGTGGTGGTTCTTCGCCTTCGTCAAAAGATGCTCCTCCTCCTCCTCCTTTGTCAGCGGCTGATAGGATTGAGCATCAGAGAAGGAAGGTCAAACTTCTATCAATGCTTGACGAGGCATGTATTCTATTCTCTCTCTCTCTTTCTGTTCCCCTCTCACCTTCTCTCCCTCATCAAGAGTCAAGATTAATAAATAAAGTTTGTATATGGAATCAGGTGGAGCGGAGATACAACCACTACTGCGAACAAATGCAAATGGTAGTGAACTCATTCGACCTGATGATGGGTTTTGGGGCGGCAGTTCCATACACAGCACTGGCGCAGAAAGCAATGTCTCGGCATTTCCGGTGTCTGAAGGACGCAATAACAGCGCAGCTGAAACAAAGTTGTGAGCTACTAGGAGAGAAAGATGGGGTGGGGACCTCAGGTTTGACCAAGGGAGAGACCCCAAGGCTTAAGATGCTAGAACAAAGCCTAAGACAGCAGAGAGCCTTCCACCAGATGGGGATGATGGAACAAGAAGCTTGGAGACCCCAGAGAGGCTTGCCTGAACGATCTGTCAACATTTTGAGAGCCTGGCTTTTCGAGCATTTTCTCCACCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCACGACAGACTGGGCTATCGCGAAATCAGGTATCAAACTGGTTCATTAATGCCAGGGTTCGGTTGTGGAAACCCATGGTGGAAGAGATGTACCAACAAGAACTTAAAGAAGTAGAGTGTGCAGAAGAGAGAGAAAAGAACCAAAGCAACAACAGCAGTAGTGGGAACAACCTAGCACAAACTCCAAGCACACCAGCAGCGGCTACTACATCAACAGCAACAGCGTCGTCACCAACAACAACAACAAAACCAACAGGCAAAAGATCCGATATCAATGCCACCGAAAGCGACCCTTCACTCGTTGCAATCAATAGACAAGGCTTCTCGGAAAACCAAGCAAAGCAGTCCACGTCCACCACCACCACCACCACCTCCACCACTCTCGTGACCTCCGTCAGCGCCACCGCCTCTGAGGTGGCGCCACCCGTGTCTCAGTGCTTCGACTCAGACCTGCCCCCACACAGATTGATGCCCACTGATGACACGTGTCGCTTGGTCACTGCAGATTTTGGGACCGCATCTGCAACTGCTGACATTGGATCCACTCTCATTAGATTTGGGACCACACCCGGTGACGTGTCACTCACCCTAGGGCTTCGCCATGCCGGGAATATGCCCGAGAAAACTCCTTTCTCTGTTAGAGACTTTGGAGGCATTTAA 2253 0.5029 MSQDYQFSFSNGLERGRVSPQQQIRREKVRLQGGFEAAAAPLVGIEEEEPVYESAGMLSEMFNFPPAAELVEQQPVTAARQAGDWYGNRQQMISGLGDSKRQNGVNNGREGFHQHQISSINAESAAAMQLFLMNPQTRSPSPPQNHATPSSTLHMLLPNPSSNSLQGFTSSAVGGSFGQFAWLPETAHHQGGVVEGQGLSLSLSSSLEAAKAEELRMGDSGFLYFNQQQGGGGGGGASSSSYLYKNNHQQALHLHGAMGHDNNHQGHVGFGSSSLGVVNVLRNSKYVKAAQELLEEFCSVGRGQFKKSKFNGQNSNPNSNPGGGSSPSSKDAPPPPPLSAADRIEHQRRKVKLLSMLDEACILFSLSLSVPLSPSLPHQESRLINKVCIWNQVERRYNHYCEQMQMVVNSFDLMMGFGAAVPYTALAQKAMSRHFRCLKDAITAQLKQSCELLGEKDGVGTSGLTKGETPRLKMLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQELKEVECAEEREKNQSNNSSSGNNLAQTPSTPAAATTSTATASSPTTTTKPTGKRSDINATESDPSLVAINRQGFSENQAKQSTSTTTTTTSTTLVTSVSATASEVAPPVSQCFDSDLPPHRLMPTDDTCRLVTADFGTASATADIGSTLIRFGTTPGDVSLTLGLRHAGNMPEKTPFSVRDFGGI 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2804g00003 750 ProSiteProfiles 'Homeobox' domain profile. 493 556 IPR001356 GO:0003677
Mupr2804g00003 750 SUPERFAMILY Homeodomain-like 498 563 IPR009057 -
Mupr2804g00003 750 Gene3D - 499 561 - -
Mupr2804g00003 750 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 152 584 - -
Mupr2804g00003 750 SMART prehox3 275 444 IPR006563 -
Mupr2804g00003 750 Pfam Homeobox KN domain 513 552 IPR008422 GO:0003677|GO:0006355
Mupr2804g00003 750 MobiDBLite consensus disorder prediction 308 327 - -
Mupr2804g00003 750 MobiDBLite consensus disorder prediction 578 628 - -
Mupr2804g00003 750 MobiDBLite consensus disorder prediction 572 628 - -
Mupr2804g00003 750 MobiDBLite consensus disorder prediction 1 21 - -
Mupr2804g00003 750 FunFam BEL1-like homeodomain protein 4 499 561 - -
Mupr2804g00003 750 Coils Coil 559 582 - -
Mupr2804g00003 750 SMART HOX_1 496 560 IPR001356 GO:0003677
Mupr2804g00003 750 MobiDBLite consensus disorder prediction 1 18 - -
Mupr2804g00003 750 CDD homeodomain 496 557 IPR001356 GO:0003677
Mupr2804g00003 750 MobiDBLite consensus disorder prediction 308 340 - -
Mupr2804g00003 750 Pfam Associated with HOX 280 443 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2804g00003 Mupr-Chr2804 32371 38771 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2804g00003 1 543 Homeobox Transcription Factor Family AT4G36870 49.338 3.64e-136 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mupr2804g00003 POX 3.9e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2804g00003 - - gmx:100777243 1010.75