Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2803g00004 ATGTCGCATTTTGTGCTGTCTGACTTGCACTTGAGTCATGCCGGTTCATCGGGATGTGTCGAGTTCCCTTCATGCCTAATGGTTAATTGCGGGGCATGTAAAGCTCAATTTGATTGCGAGTATCGGCAAAAGGCCATTCAGAGGGGCAGAGTCTTGGCATACACGAGTGTCTTCTATATTAGTGTTCAATTGCATGCAATTACTTTTGGAATTATCATGGCTCCTAATCCAAGAGTCGTTAAGGCTTATGATGCTATGAGGTCCTTAGGAATTTATGATAAAGATGTGAAATCGGTGTTAAAAAAATTGTTACAATTGTATGATAGAAAGTGGGAACTTATTGAAGAAGACAATTATCGCACACTCATAGATGCATACTTTGAGTTGAAGGAAGATAAGCAAGCAGAAGGTAAGAGAAAAGCTCCAATCAGTTACCTTAATGGGGAAAGGCCAAAACAGAAGCTGCACTTGGTAGATGGAGATGACCAGGTCTCATCACCTAACAACTCAATACAAGGGTTGTCTGTACAAGACCCTGACATGCCTCCAAAGACTTTTAAACAGGAAGTCATTAAACCTTCTCAAACCTCCATCGGAGATATGGAGCCCACAACCAGTTCACAAGCATTGCAGACATTGTCGAGTGAGGTAGAAATGTTCTCAACGTTACCTTGCACAGCTGCTAGAGATAGAAAATTGGGTCCTGAGAAAACATCAGCTGCAGGGCATTGTGAAGATCCAATTGATGAACCAAGCAATCCTCATATCCGTAGGAAAAATATATCAAGTAATCGTCATCAGAATGAGCTTATGATACCAAGAGCTGAGAAACCCAAGTTACATCTTGGACCTGCTTCAACCAGTTATAATGCTCTGTATCAAATTGTGCACAAGAAAGATGGTAGCTCAGCATGCAATAATAACAACAGAACTCAGAAGGGGAATATTAACATCGCTTCTTCACCTTTTGGAGAAGTTAAAATTTCTTTAAACTGTGATGCTGCTTTGGGACAACCAAACTTCCATATTCCTGATTTGGATGCTGTTATGAAGTCCATGGAGGAGAAATACCTGAAGGCTTACAAGATCGTTGAGCCTGAATTATCTATGGTGAAGCTATTAGATGATCTATGTGAAAGTTACTTGAAGCTGGGCTTGAATTTAAATCGAAAGAGGTTTACTCTCAAGTATGCTAATTCACGTAATGTGGCATGTCTGCCACAGAAAGCTGGTACTGAAGATGACAAGAATTCCTTGTACTTTCTCGGTGACCTAGCAAAAGGTTCAGAGAATGTTAAAATATCATTGTTAGATGAAACTGGAAGGGAGGACTTGCCAAAGTTTAATTACATACCCTGTAATATAATATATCAAGATGCTAACGTAAATATTTCACTTGCTCGTATTGCGGATGAGGGTTGCTGTGCTGATTGTGCTGGTGACTGTCTTTCCTTATCATTTCCTTGTGCATGTGCTCAAGAAACAGGTGGAGAGTTTGCTTACTCTCCACAAGAATGCCCACTGGAGAGGTTTAAGAATGACAACATGCCTGAACCATGCAAGGGGCATCTGGTTAGGAAGTTTATCAAGGAATGCTGGAGGAAATGTGGATGTGACATGCAGTGTGGTAATCGGATAGTGCAACGAGGTTTAAGATGTAAATTGCAGGTGTATTTGACTCGAGAAGGAAAGGGATGGGGCGTGAGAACACTAGAAGATTTGCCAAAGGGATGTTTTGTATGTGAATATGCAGGGGAAATATTAACCAATACAGAATTATATGAAAGGACTGTGCAGATGAGCGGCAATGACAGGCATACATATCCTGTAACCCTTGATGCAGACTGGGGCTCGGAACGGGTGTTAAAGGATGAGGATGCACTATGCTTAGATGCAACATATAATGGAAATGTTGCGAGTTTTCGATAA 1929 0.4101 MSHFVLSDLHLSHAGSSGCVEFPSCLMVNCGACKAQFDCEYRQKAIQRGRVLAYTSVFYISVQLHAITFGIIMAPNPRVVKAYDAMRSLGIYDKDVKSVLKKLLQLYDRKWELIEEDNYRTLIDAYFELKEDKQAEGKRKAPISYLNGERPKQKLHLVDGDDQVSSPNNSIQGLSVQDPDMPPKTFKQEVIKPSQTSIGDMEPTTSSQALQTLSSEVEMFSTLPCTAARDRKLGPEKTSAAGHCEDPIDEPSNPHIRRKNISSNRHQNELMIPRAEKPKLHLGPASTSYNALYQIVHKKDGSSACNNNNRTQKGNINIASSPFGEVKISLNCDAALGQPNFHIPDLDAVMKSMEEKYLKAYKIVEPELSMVKLLDDLCESYLKLGLNLNRKRFTLKYANSRNVACLPQKAGTEDDKNSLYFLGDLAKGSENVKISLLDETGREDLPKFNYIPCNIIYQDANVNISLARIADEGCCADCAGDCLSLSFPCACAQETGGEFAYSPQECPLERFKNDNMPEPCKGHLVRKFIKECWRKCGCDMQCGNRIVQRGLRCKLQVYLTREGKGWGVRTLEDLPKGCFVCEYAGEILTNTELYERTVQMSGNDRHTYPVTLDADWGSERVLKDEDALCLDATYNGNVASFR 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2803g00004 642 MobiDBLite consensus disorder prediction 233 256 - -
Mupr2803g00004 642 ProSiteProfiles SET domain profile. 553 642 IPR001214 GO:0005515
Mupr2803g00004 642 ProSiteProfiles Pre-SET domain profile. 474 550 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mupr2803g00004 642 MobiDBLite consensus disorder prediction 233 259 - -
Mupr2803g00004 642 Pfam Pre-SET motif 426 545 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mupr2803g00004 642 Gene3D - 67 132 IPR043017 -
Mupr2803g00004 642 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 73 641 - -
Mupr2803g00004 642 Gene3D SET domain 403 642 IPR046341 -
Mupr2803g00004 642 Pfam SET domain 565 618 IPR001214 GO:0005515
Mupr2803g00004 642 Pfam Ubiquitin-binding WIYLD domain 78 131 IPR018848 -
Mupr2803g00004 642 SMART preset_2 422 537 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mupr2803g00004 642 SUPERFAMILY SET domain 433 641 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2803g00004 Mupr-Chr2803 24603 28667 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2803g00004 529 641 C2H2 Transcription Factor Family AT2G23740 41.228 5.40e-19 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mupr2803g00004 Pre-SET 9.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2803g00004 - - gsj:114402909 917.531