Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2754g00001 ATGTGTCTCGGCACTAAAAGCGATCAAGTACTGTATATAGAATTCAAGATGAGTTGGAATCCACACATCGAGGGCCATTACAATAACACCAGCTATCCCTATAGTACAGCAGGAAGCTTTATAGAATATGTTGAAGGTCTTACATACGAACATGTTAACTTCATTTTTTCTGGTCCCTCACATGCTCAGGAGAGTTCATACCCTTCAACTACAAGCTTCTATAAATCTGGGCTATCTGAACGAGAGATTATATCATACTATCGGGACAGTCATGGTTATGGGGTGAATCATCATCAACCATCGATGGATGAGTATAGAAGGCCTTCGGAAAACTCGGCAACAACCAATGAACATATGCCATCAGTAATACGTATAGTAGCGGAAGAAGAAGTAATCAATTCCAACAGTAGTACTATTCAATGTCCACGAAGACATCATAACAATTCCAATGATAGTCAGGTCATTTGGGAAGACAATATTGATCCGGACAACATGACCTATGAGGTTGGACTTAAAAGTGAACTACTAGAATTAGGTGAGGCAGTTGGAACTCAGAGCCGCGGTCTCTCCCAAGAACAGATCTCATTGCTTCCAGTTTCAAAGTACAAGTGTGGCTTGTTCTTCTTCTTCAGGAAGAAGTCACGGGACGAGAGATGCGTGATTTGCCAGATGGAATATAAAAGAGGGGACAAGAGGATCACTTTACCATGTGAACATGTCTATCATGCTAGCTGTGGGAACAGATGGCTTAGCATCAATAAGGCAAGTTATTTAGGAAGGAGATCCTCTGAGTTTGCTTGCCCTATGTGTTACACGGAGGTGTTTGCCGATGTGTCAAAACACAAATAA 849 0.4158 MCLGTKSDQVLYIEFKMSWNPHIEGHYNNTSYPYSTAGSFIEYVEGLTYEHVNFIFSGPSHAQESSYPSTTSFYKSGLSEREIISYYRDSHGYGVNHHQPSMDEYRRPSENSATTNEHMPSVIRIVAEEEVINSNSSTIQCPRRHHNNSNDSQVIWEDNIDPDNMTYEVGLKSELLELGEAVGTQSRGLSQEQISLLPVSKYKCGLFFFFRKKSRDERCVICQMEYKRGDKRITLPCEHVYHASCGNRWLSINKASYLGRRSSEFACPMCYTEVFADVSKHK 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2754g00001 282 SMART ring_2 219 270 IPR001841 -
Mupr2754g00001 282 MobiDBLite consensus disorder prediction 95 116 - -
Mupr2754g00001 282 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 179 276 IPR013083 -
Mupr2754g00001 282 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 21 275 IPR033276 GO:0004842|GO:0016567|GO:0046621
Mupr2754g00001 282 ProSiteProfiles Zinc finger RING-type profile. 219 270 IPR001841 -
Mupr2754g00001 282 Pfam Ring finger domain 218 270 IPR001841 -
Mupr2754g00001 282 FunFam E3 ubiquitin ligase BIG BROTHER 179 275 - -
Mupr2754g00001 282 SUPERFAMILY RING/U-box 215 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2754g00001 Mupr-Chr2754 668 4465 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2754g00001 21 281 C3H Transcription Factor Family AT3G63530 39.326 1.69e-51 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2754g00001 K19045 - gmx:100793907 404.445