Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2753g00012 CTATTTAGTGAGTGCCCACATCCAGATGAAAGACAAAGGCGTCAAATAGCCAAAGATCTTGAGCTTGAGCCAAAACAAGTGAAGTTTTGGTTTCAAAATAAGAGGACTCAAAGAAAGACTCAAACTGAGCGAGCAAACAATAATGCTCTTCGTGCTGAGAATGAAAGAATACAAAACGAAAACCTCGTAATGAAAGAGGCATTGAAGAATATAATGTGCCCATCTTGTGGGGGTCCACCCTATGACAAAGAAGGACATGAACATTCTCTAGAACAACTTCGTCTCGAAAATGCTCGTCTAAAGGAAGAGCGTGAGAAGGTGTCTAATCTTCTTGCAGAGTATATGGAGAAACCTATGTCAGAACTAGAGTTGGAGTTAACTTCTATCAAAGGATCTTCATCACATGATCCATTATTAGGAAGTTCTCTAAAACCAGGAGTTGGAAGTGCTTGTATGAATCTTTGTGGTTCAACAAGTTTTTCATTTCAAGATGAAGATATCAAGTCTAACCCAGGGAGCAAAATAACTGAAATGGAAAAAGCAATGATGTCACAAGTTGCAATGGCCGCTAAGGAAGAATTATTCAAGCTTTTGTGCTCAAATGAGCCTTTATGGGTGAAGTCTTCAATTGATCAAAGATTTGTTCTTCATCTTGAATGTTATGAAAAGCTTTTTCCAAGAATTAATCACTTCAAAAATTCCAAAGCGCGTGTAGAATCATCAAAAGATTCGCGAATTGTGAGAATTAAGGCAATGGAATTAGTTGACATGCTTTTAAATTCGGGAATCTGGACAAATCTTTTCTCAACAATTATTACAAAGGCGCACACAATCGAAGTACTTGAAAATGGTTCATTAGGAAATCAAAATGGAGCTTTGTTGTTGATGTATGAAGAGATGCATGTTCTTTCACCTTTGGTGCCATCTCGAGAATTCTATTTCCTTCGCTATTGTCAACAAGTTGAAGCTAGTATATGGGTGATAACAGATGTGTCAGTTGATTTTATGAAAAATAACAACTCTAATCCTTACTCTTGGAGGTTTCCTTCTGGATGCATGATTCAGGAAATTTCTAATGGGTTGTGTCAGGTTTCTTGGGTTGAACATGTGGAGGTGGATGAGAAGATCCAAACACATGAGCTATATAGAGATATTGTTAATAACAATATTGCATATGGAGCAGAAAGATGGCTTATGGAACTTCAAAAAATGTGTGAAAGATTTACCAGTGTTGGAGCTGAATACATACCTAGTTATGAAATGGGAAGAGTGATCACTACACTTGGAGGAAGGAAGATTATGATGAAACTTTCTCATGGAATGGTTAAGAGCTTTTATGGAATTTTAAACATGTCAAGTAAGATGGACTTCCCACAACATTTAGGTGATGAGAATAGCGAGATTAGGATCTCTGTTCGCAAAAACACAAACTCAAGTCAACCAAATGCCATGATTATTATCACGGCCGTGACATCTTTTTGGCTTCCTCTCCCTTCTCAGAATCTTTTTGACTTCTTTAGAGATCCAATAAGACGTGCTAAGTGGGATGTAATGTGTTATGGAAATCCTGTGCATGAGGTTGCACGCATCGCCATCGGAACTCATCCAAGCAACAATATATCAATTATTCAGCCTATCGATCCAACTACAAATAATGTGGTGATTATTCAAGAAAGTTCCATTGATCCTTTGGGATCATATGTTGTATATTCTCCGATCAATATACTTGACATAAAGAGGGCTATAAATGGTGAAGATTCATCAACAATGTCAATTCTTCCATCAGGCATTGTCATCTCAGAAGATGGACAATCTATTGCAAATGCTCGAGCATCGAGTAGTGGAAATGGTGATACAAGAACAAAAGGTTCATTATTGACTATAGCTTTCCAAATACTGATGAATAATCCAACAACTATGACCTTGGAATCTGTGGCTGTTGTTAACTCTCTCATAACCTCAACAATAAAAAACATAAATGATGCTTTGGTCAATGGTTCTGATTTGGGGTTG 2013 0.3731 LFSECPHPDERQRRQIAKDLELEPKQVKFWFQNKRTQRKTQTERANNNALRAENERIQNENLVMKEALKNIMCPSCGGPPYDKEGHEHSLEQLRLENARLKEEREKVSNLLAEYMEKPMSELELELTSIKGSSSHDPLLGSSLKPGVGSACMNLCGSTSFSFQDEDIKSNPGSKITEMEKAMMSQVAMAAKEELFKLLCSNEPLWVKSSIDQRFVLHLECYEKLFPRINHFKNSKARVESSKDSRIVRIKAMELVDMLLNSGIWTNLFSTIITKAHTIEVLENGSLGNQNGALLLMYEEMHVLSPLVPSREFYFLRYCQQVEASIWVITDVSVDFMKNNNSNPYSWRFPSGCMIQEISNGLCQVSWVEHVEVDEKIQTHELYRDIVNNNIAYGAERWLMELQKMCERFTSVGAEYIPSYEMGRVITTLGGRKIMMKLSHGMVKSFYGILNMSSKMDFPQHLGDENSEIRISVRKNTNSSQPNAMIIITAVTSFWLPLPSQNLFDFFRDPIRRAKWDVMCYGNPVHEVARIAIGTHPSNNISIIQPIDPTTNNVVIIQESSIDPLGSYVVYSPINILDIKRAINGEDSSTMSILPSGIVISEDGQSIANARASSSGNGDTRTKGSLLTIAFQILMNNPTTMTLESVAVVNSLITSTIKNINDALVNGSDLGL 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2753g00012 671 SUPERFAMILY Bet v1-like 431 637 - -
Mupr2753g00012 671 SUPERFAMILY Homeodomain-like 2 45 IPR009057 -
Mupr2753g00012 671 Pfam Homeodomain 1 39 IPR001356 GO:0003677
Mupr2753g00012 671 Coils Coil 40 70 - -
Mupr2753g00012 671 Coils Coil 83 117 - -
Mupr2753g00012 671 Pfam START domain 186 407 IPR002913 GO:0008289
Mupr2753g00012 671 Gene3D - 219 408 IPR023393 -
Mupr2753g00012 671 SMART START_1 185 407 IPR002913 GO:0008289
Mupr2753g00012 671 ProSiteProfiles START domain profile. 176 410 IPR002913 GO:0008289
Mupr2753g00012 671 CDD homeodomain 2 41 IPR001356 GO:0003677
Mupr2753g00012 671 ProSitePatterns 'Homeobox' domain signature. 16 39 IPR017970 GO:0000981|GO:0006355
Mupr2753g00012 671 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 663 IPR042160 -
Mupr2753g00012 671 Gene3D - 1 58 - -
Mupr2753g00012 671 CDD START_ArGLABRA2_like 180 406 - -
Mupr2753g00012 671 SUPERFAMILY Bet v1-like 176 408 - -
Mupr2753g00012 671 ProSiteProfiles 'Homeobox' domain profile. 1 41 IPR001356 GO:0003677
Mupr2753g00012 671 SMART HOX_1 1 45 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2753g00012 Mupr-Chr2753 50541 56695 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2753g00012 2 663 Homeobox Transcription Factor Family AT1G73360 42.836 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr2753g00012 START 8.6e-37 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2753g00012 K09338 - gmx:100794552 973