Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2753g00003 ATGGATTCTTCAATGGCAAGTGCTGGTGGGTCTGGTGACGAAGGCTCTCACAACTTAGACAAGGGAAAAAGACCCTCCTACAAACGACTTAGTTCTGCTCAAATACTCAAACTTGAGAAATTTATCAAGGAGTGCCCACATCCAGATGAAGCCCAACGACGTCTACTAGCTTCTGAGATTGGTCTTGAACCCAAACAAATAAAGTTTTGGTTTCAGAACAAGAGGACCCAAATCAAGAATCAACACGAGCGAGCAGATAACACTGCTCTTCGTGTTGAGAATGATAGGATAAATAGTGAAAACCTCCTCATGAAAGAGGCGTTGAAGAATATGCTTTGCCCATCTTGTGGGGGTCCACCGTATCCAGAAGGAGAACATGAACACGTTGTCCAAAAGATGCAACTTGAAAATGCTCAGCTAAAAGAAGAGCACGAGAAAGTGTCTAGTCTTCTTGCAAGGTACTTGGAGAAACAGATGTCACCACCTGAGTTCCAACAGGCTTTTATACCTATCATAGGATCAAGTTCACGTACTCCACCACGTGGGAATTCACTAAACCAAGATATTGATGGAAGCCCACGTTCAGATCAAAGTCATGGTAAGCAAATTATGGATGGTAACATGTTATTGCCTAATAACTCAGTGGGAAGCGAAGGTATAGAAAAATCCCTTATGTCAAAGGTTTCCGCTGCCGCAATTGAAGAATTGGTTAAGCTTCTTCGCATTGATGAGCCCTTTTGGATCAAGTCCTCAACTCAAGATGGGAAGCTCAGTCTTAACCATGAAAATTATGAAAAAATGTTCCCAAGGACCAACCATTTCAATGGGGCCAACGTGCGTGTAGAAGCAACAAAAGATTCGGGAATAGTTACCATTAATTGCATTCAACTAGTTGACATGTTTCTGGATCCGGTCAAATGGGAGAATCTCTTCCCAACGATTATTACAAAAGCAGAAACAATGAAAGTACTTGAAAGTGGCTCGCTAGGAAATCGAAGTGGAGCCACGCAGTTGATGTTTGAACAAATGCACGTTCTTTCACCTCTAGTGCAACCTCGAGAATTTCAATTCCTTCGCAGTTGTCAACAAATTGAAGAAGGTGTATGGGTAATAGCGGATGTGTCGTTTGATTCCTTTCGACAAACGACCTCTATTTTTCACTCTTGGAGACATCCTTCTGGTTGCATGATCCAAGAAATGCCTAATGGGTGTTCCATGGTTACTTGGGTCGAACATGTAGAAGTGAATGATAAAATCCAAATGCATCAGCTGTATAGAGACCTTGTTGGTACGGGTATTGCATACGGAGCCGAAAGGTGGATTATGGAACTTCAAAGAATCTGCGAGAGATTTGCTTGCTTTTATGTTGAAAAGATACCTAATCATGACTCTGAAGGAGTGATCAATTCTCTCGAAGGAAGGAGAAGCGTGATGAATTTTTCTCACCGAATGATCAAGAACTTTTGTGAAAGTATAACCATGTCGGGTAACTTGGACTTGCCACATTCAAATGTGGAGAATAATAGTGGTGTGAGGGTCTCCATTCGCAAAGGCACAAACCTTGGTCAACCAAATGGCATGATTGTTGTAGCTGCTACCTCCCTTTGGCTTCCTCTCCATTATATGAAGGTTTTTGAGTTCTTCACAGATGATAGAAAGCGTGCTCAGTGGGATGTTCTTTGCTGTGGAACTCCCGTGCACAGGGTTGCACATATCTCAAATGGAATTCATCCTGGCAACTGTATCTCCATTCTTAGGCCATTCATCCCTAGCGAGAACAATGCGTTGATTCTTCAAGAGAGTTTTACAAATCCTATGGGATCGTATGTTATATATGCTCCATCGGATGTGACAACAATGAACTCGGCAATAAAGGGAGAAGACTCTTCGATGTTACCAGTTCTTCCATCAGGTTTTGTCATCTCTGCAGATGGTGAACCATCTGCAGCTTTGGGAGCATTTAACAGTACAAATGATGAAAGGTTGGGAGGCTCAATTCTGACCGTGGCTTTCCAAATTCTGGCTTCTAGTCCAGATGGAATCAATATGCCAAATATAGAATCTGTGGCAGCTGTCAACACCCTTTTGACCTCCACAATCATCAAAGTCAAGGATGCTTTGAACTGCAACAACATG 2136 0.4242 MDSSMASAGGSGDEGSHNLDKGKRPSYKRLSSAQILKLEKFIKECPHPDEAQRRLLASEIGLEPKQIKFWFQNKRTQIKNQHERADNTALRVENDRINSENLLMKEALKNMLCPSCGGPPYPEGEHEHVVQKMQLENAQLKEEHEKVSSLLARYLEKQMSPPEFQQAFIPIIGSSSRTPPRGNSLNQDIDGSPRSDQSHGKQIMDGNMLLPNNSVGSEGIEKSLMSKVSAAAIEELVKLLRIDEPFWIKSSTQDGKLSLNHENYEKMFPRTNHFNGANVRVEATKDSGIVTINCIQLVDMFLDPVKWENLFPTIITKAETMKVLESGSLGNRSGATQLMFEQMHVLSPLVQPREFQFLRSCQQIEEGVWVIADVSFDSFRQTTSIFHSWRHPSGCMIQEMPNGCSMVTWVEHVEVNDKIQMHQLYRDLVGTGIAYGAERWIMELQRICERFACFYVEKIPNHDSEGVINSLEGRRSVMNFSHRMIKNFCESITMSGNLDLPHSNVENNSGVRVSIRKGTNLGQPNGMIVVAATSLWLPLHYMKVFEFFTDDRKRAQWDVLCCGTPVHRVAHISNGIHPGNCISILRPFIPSENNALILQESFTNPMGSYVIYAPSDVTTMNSAIKGEDSSMLPVLPSGFVISADGEPSAALGAFNSTNDERLGGSILTVAFQILASSPDGINMPNIESVAAVNTLLTSTIIKVKDALNCNNM 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2753g00003 712 ProSitePatterns 'Homeobox' domain signature. 56 79 IPR017970 GO:0000981|GO:0006355
Mupr2753g00003 712 SMART START_1 227 450 IPR002913 GO:0008289
Mupr2753g00003 712 SUPERFAMILY Homeodomain-like 23 86 IPR009057 -
Mupr2753g00003 712 MobiDBLite consensus disorder prediction 1 27 - -
Mupr2753g00003 712 CDD homeodomain 21 82 IPR001356 GO:0003677
Mupr2753g00003 712 Pfam START domain 228 450 IPR002913 GO:0008289
Mupr2753g00003 712 FunFam Homeobox-leucine zipper protein HDG1 11 97 - -
Mupr2753g00003 712 ProSiteProfiles START domain profile. 218 453 IPR002913 GO:0008289
Mupr2753g00003 712 SUPERFAMILY Bet v1-like 506 674 - -
Mupr2753g00003 712 CDD START_ArGLABRA2_like 222 449 - -
Mupr2753g00003 712 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 21 708 IPR042160 -
Mupr2753g00003 712 Pfam Homeodomain 26 79 IPR001356 GO:0003677
Mupr2753g00003 712 Coils Coil 130 157 - -
Mupr2753g00003 712 SMART HOX_1 23 85 IPR001356 GO:0003677
Mupr2753g00003 712 Gene3D - 12 95 - -
Mupr2753g00003 712 Gene3D - 226 431 IPR023393 -
Mupr2753g00003 712 ProSiteProfiles 'Homeobox' domain profile. 21 81 IPR001356 GO:0003677
Mupr2753g00003 712 MobiDBLite consensus disorder prediction 173 203 - -
Mupr2753g00003 712 SUPERFAMILY Bet v1-like 221 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2753g00003 Mupr-Chr2753 28130 35151 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2753g00003 23 708 Homeobox Transcription Factor Family AT1G73360 44.398 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr2753g00003 START 2.6e-35 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2753g00003 K09338 - gmx:100795075 1139.41