LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr2747g00002	ATGGCAAGAGGGGGTGGACTCTCCATTGATTCAGATCCAATTGGGAGCTTCTTCCCCCACAAGCCAGTAATTCTCAACTCTTTCTCTGAACACCACAACAACAACAACAGCATCACTATAACCAGCCAACACAAGTGGAAACTTTGTCCCAACATGGATGCCGCAGTTACCAGAAAGAGGTCTCCATCATCCACTCCCAACACCTCCACCTCCACCTCCACCATCCCCTTCCAAGTCAACCTTACCTCCGATGACAGGAGGCCCCACATCGACGAGATGGACTTCTTTCCCAACAAGACCAACTACGATGACCACCACCACCACCACCACAACAACAACCTTAACCTTGCCTCTGCCTCCACCTCTGCACTTCCCTCACTTAACCACCTTCATCACCACTCACATGATCATTCCTCCACTCCCACTATCTTGGAATTGAAAGTAAACACTGGTTTGAATCTTCTTACTACCAACACCAGCCGTAATCAATCCATGGTGGAAGATGACATGTCCCCTAATTCAGTAGACAGAAGAAGAGCTAAGAGTGAGATGCTTGTTCTTCAAGCTGAGCTTGAGAGAACGAAGGTCGAGAACTATAAGCTGAAGAACATGCTTGATCAGGTTCACACCAATTACAATTCATTGCAGATGCATTTGATGTCTTTGATGCAGGAACAGAAGAGTGAGGAGGAGGCTCAACAACAACAAGTGTTTGATGGAAAAATAGAAGAGGAGAAACAAAGTGGGAATGGTGGAGCCTTGGTGCCAAGGCAGTTTATGGATCTTGGATTGGCTTCTAATGCTGATACTAATGAACCTTCGCTTTCTTCGTCTGGTGGAAGAAGTCAGGATAGGTCAAAGTCACCCGCAAATAATGCAGAGGTGGCATCCAAGGAATTTGGCACTAGGAAGAATGGGAGTCCTAGTGATGAAGAACTAGTGTTTGATCAAGACAAGAAGGAATTTGGCAGGGGAATTGAGAGAGAGGGTAGTACCTCCGATCAAGGGGTGACCGCTAATAACAATGTTCCAAAGTTTAGTCCTCCTAGAAATGTTGATCAAGCTGAGGCCACCATGAGGAAGGCTAGAGTTTCTGTTAGAGCTCGATCAGAGGCACCCATGATGACTGATGGGTGTCAATGGCGAAAGTATGGGCAGAAGATGGCCAAAGGAAACCCATGTCCTCGAGCATATTATAGATGTACAATGGCAGCAGGTTGCCCGGTGAGAAAACAGGTGCAAAGGTGTGCTGAAGACCGAACAATACTAATCACAACATATGAAGGGAATCACAACCACCCTTTGCCTCCAACGGCTATGGCAATGGCACAAACAACATCCTCAGCTGCAAGAATGCTGCTTTCAGGGCCAATGTCAAGTGCTGATGGCCTATTGAATGCAAACTTCCTCTCAGGAACATTCCTTCCTTGCTCTTCCAGCATGGCAACTATCTCAGCATCAGCTCCATTCCCAACTGTTACATTGGACTTGACACAGTCTCCAAACCCATTACAGTTCCCAAAGCCCCCAAGCCAATTCCAATTCCCCTTCCCTGGTATCCCTCAGATATTTGGTCAGGCACTGTATAACCAGTCAAAGTTTTCTGGCCTTCAAATGTCCCAAGATGGAGACACTTCCCAATTGAGTAATCAAACTCAACGCCCACCACCACACCTTGCTGACACAGTGAGTGCTGCCATTGCAGCTGACCCCAACTTCACTGCAGCTTTGGCAGCAGCCATCACTTCCATCATTGGGGGTGCACAGCCAAACAACAATAACACTATTAATAATAATAATGGCACCACATCCAACAACAACAGCAATGGCAATATTACATCAAGCAACAACAAATAA	1857	0.4658	MARGGGLSIDSDPIGSFFPHKPVILNSFSEHHNNNNSITITSQHKWKLCPNMDAAVTRKRSPSSTPNTSTSTSTIPFQVNLTSDDRRPHIDEMDFFPNKTNYDDHHHHHHNNNLNLASASTSALPSLNHLHHHSHDHSSTPTILELKVNTGLNLLTTNTSRNQSMVEDDMSPNSVDRRRAKSEMLVLQAELERTKVENYKLKNMLDQVHTNYNSLQMHLMSLMQEQKSEEEAQQQQVFDGKIEEEKQSGNGGALVPRQFMDLGLASNADTNEPSLSSSGGRSQDRSKSPANNAEVASKEFGTRKNGSPSDEELVFDQDKKEFGRGIEREGSTSDQGVTANNNVPKFSPPRNVDQAEATMRKARVSVRARSEAPMMTDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILITTYEGNHNHPLPPTAMAMAQTTSSAARMLLSGPMSSADGLLNANFLSGTFLPCSSSMATISASAPFPTVTLDLTQSPNPLQFPKPPSQFQFPFPGIPQIFGQALYNQSKFSGLQMSQDGDTSQLSNQTQRPPPHLADTVSAAIAADPNFTAALAAAITSIIGGAQPNNNNTINNNNGTTSNNNSNGNITSSNNK	618

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr2747g00002	618	MobiDBLite	consensus disorder prediction	266	351	-	-
	Mupr2747g00002	618	MobiDBLite	consensus disorder prediction	586	618	-	-
	Mupr2747g00002	618	ProSiteProfiles	WRKY domain profile.	370	436	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mupr2747g00002	618	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	150	597	IPR044810	GO:0003700
	Mupr2747g00002	618	MobiDBLite	consensus disorder prediction	304	328	-	-
	Mupr2747g00002	618	FunFam	probable WRKY transcription factor 31	360	437	-	-
	Mupr2747g00002	618	SMART	WRKY_cls	375	435	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mupr2747g00002	618	MobiDBLite	consensus disorder prediction	266	295	-	-
	Mupr2747g00002	618	MobiDBLite	consensus disorder prediction	57	75	-	-
	Mupr2747g00002	618	Gene3D	WRKY domain	360	437	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mupr2747g00002	618	SUPERFAMILY	WRKY DNA-binding domain	368	436	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mupr2747g00002	618	MobiDBLite	consensus disorder prediction	331	348	-	-
	Mupr2747g00002	618	Coils	Coil	177	197	-	-
	Mupr2747g00002	618	MobiDBLite	consensus disorder prediction	537	558	-	-
	Mupr2747g00002	618	MobiDBLite	consensus disorder prediction	56	75	-	-
	Mupr2747g00002	618	Pfam	WRKY DNA -binding domain	377	434	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr2747g00002	Mupr-Chr2747	20435	22891	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr2747g00002	148	587	WRKY Transcription Factor Family	AT1G62300	51.073	3.74e-122	371

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Mupr2747g00002		WRKY	3.3e-24	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr2747g00002	-		-	gmx:100127384	771.541