Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2745g00004 ATGGCCATTGAAAGCGAAGAAGGAAAGGAATACATTTTCAGGTCGAAGCTACCGGACATAGACATCCCGAAACACCTACCCCTGCACTCATACTGCTTCGAGAATCTTGGCGAGTATGAGTCACGCCCCTGCTTGATCAATGCACCCACCGGAGAGGTCTACAGCTACGGAGAAGTGGATGCCACTGCCAGAAAAGTGGCGAGGGGCCTCAACAAACTGGGCGTGCAACAGGGCGAGGTCATCATGATCTTGCTCCCAAACTCCCCCGAATTCGTGTTCTCGTTTCTAGGGGCGTCGTATCGGGGAGCCATGGCCACCGCAGCCAACCCGTTCTTCACGGCGGCGGAGATTGCAAAGCAGGCGAAGGCCTCGAACGCGAAGGTGCTGATCACACAAGCATCTTACTACGAGAAAGTGAAGGAGCTGGATGTGAAGCTGGTGTTGGTGGACACGGTGGGGGAGGAGCATATCCATTTCTCAGAACTGTGTGAATATGAGAGCGAGGATAGCAACGATGTGGAGGTGAATATAAACCCAGATGACGTGGTGGCATTGCCGTATTCATCGGGTACAACAGGACTACCGAAAGGTGTGATGCTAACACACAAGGGGTTGGTGACGAGTATTGCTCAACAGGTGGACGGTGAGAACCCAAACCTGTACTATCACTGTGAGGACACCATCTTGTGCGTGCTTCCCCTGTTTCATATCTACTCCCTCAACTCTGTTTTGCTCTGTGGCTTGCGCGCCAAGGCTACCATTCTTCTCATGCCTAAGTTCGAAATAAATGCCTTGCTTTCTCTAATTCACAAATACAAAGTCACTATTGCCCCCGTTGTCCCTCCCATCGTTCTTTCCATTGCCAAGTCTCCCCATCTCTCCAACTACGATCTCTCTTCCATTCGTGTCCTCAAGTCTGGTGGTGCTCCCCTCGGTAAAGACCTCGAAGACACTGTCCGGGCCAAATTCCCCAACGCCAAACTTGGCCAGGGATACGGAATGACGGAGGCAGGGCCCGTGCTAACAATGTCCTTAGCTTTTGCTAAAGAAGCGGTGGATGTAAAACCAGGTGCGTGTGGAACCGTTGTAAGAAATGCAGAGATGAAGATTGTGGATCCTGAAACAGGTCATTCTTTACCTCGAAACCAGTCCGGTGAAATTTGCATAAGAGGCGACCAGATCATGAAAGGTTATCTAAACGATGTGGAGGCGACGGAGAGAACAATAGACAAAGAGGGTTGGTTGCACACAGGTGACATCGGCTACATCGACGACGACGATGAATTATTCATCGTTGATAGGCTAAAGGAATTGATCAAATACAAAGGATTTCAAGTTGCTCCAGCTGAACTTGAATCCCTTCTTCTCACTCATCCTAACATCTCTGATGCTGCTGTCGTACCAATGAAGGATGAAGCAGCGGGAGAGGTACCTGTTGCATTTGTGGTGAGATCAAATGGTTATACTGACACAACGGAGGAAGACATAAAGCAATTTATCTCCAAACAGGTGGTGTTTTACAAAAGAATAAACCGAGTATTCTTCATTGAAGCAATTCCAAAGTCACCATCAGGCAAAATCTTGCGTAAGGATCTAAGAGCAAAGCTAGCATTAGAAGCAGCTGTTCAAAAATGA 1635 0.4875 MAIESEEGKEYIFRSKLPDIDIPKHLPLHSYCFENLGEYESRPCLINAPTGEVYSYGEVDATARKVARGLNKLGVQQGEVIMILLPNSPEFVFSFLGASYRGAMATAANPFFTAAEIAKQAKASNAKVLITQASYYEKVKELDVKLVLVDTVGEEHIHFSELCEYESEDSNDVEVNINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSIAQQVDGENPNLYYHCEDTILCVLPLFHIYSLNSVLLCGLRAKATILLMPKFEINALLSLIHKYKVTIAPVVPPIVLSIAKSPHLSNYDLSSIRVLKSGGAPLGKDLEDTVRAKFPNAKLGQGYGMTEAGPVLTMSLAFAKEAVDVKPGACGTVVRNAEMKIVDPETGHSLPRNQSGEICIRGDQIMKGYLNDVEATERTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELESLLLTHPNISDAAVVPMKDEAAGEVPVAFVVRSNGYTDTTEEDIKQFISKQVVFYKRINRVFFIEAIPKSPSGKILRKDLRAKLALEAAVQK 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2745g00004 544 ProSitePatterns Putative AMP-binding domain signature. 185 196 IPR020845 -
Mupr2745g00004 544 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 534 - -
Mupr2745g00004 544 Pfam AMP-binding enzyme 37 441 IPR000873 -
Mupr2745g00004 544 FunFam 4-coumarate--CoA ligase 2 437 539 - -
Mupr2745g00004 544 FunFam Long-chain-fatty-acid--CoA ligase FadD 14 436 - -
Mupr2745g00004 544 Gene3D - 436 539 IPR045851 -
Mupr2745g00004 544 Pfam AMP-binding enzyme C-terminal domain 450 526 IPR025110 -
Mupr2745g00004 544 Gene3D - 6 435 IPR042099 -
Mupr2745g00004 544 SUPERFAMILY Acetyl-CoA synthetase-like 16 536 - -
Mupr2745g00004 544 CDD 4CL 22 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2745g00004 Mupr-Chr2745 37781 40123 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2745g00004 10 504 Monolignol Biosynthesis Gene Families AT1G51680 69.901 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2745g00004 K01904 - gmx:547944 914.064