Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2741g00003 ATGGAAAAGCTGAATTTTGGTAAAAATGGAGTGAGCAAATTGCCTCCTGGTTTTCGTTTTCAGCCAACAGATGAAGAGCTTGTTTTTCAATACTTGAAATGTAAGGTCTTCTCCTTCCCCTTGCCTGCTTCTATTATTCCTGAAATCAATGTCTGCAAGCACGATCCTTGGGATTTGCCAGAAGTGTGTTCAGGGAATTGTGATGATACGCAAGAGAGGTACTTTTTCAGCAGGAAGGAAGGCAAGTATCGAAATGGTAACCGCATGAATCGAACAACAAAGTGTGGGTATTGGAAGGCAACGGGATCAGACAAAAGAATAACATGTTCAACGTGTAATAATGGTATTGTGGGAATAAGAAAAACGTTGACTTTTTATGAAGGGAAATCTCCAAGAGGCTCAAGAACTGACTGGGTCTTGCATGAATATCGTCTCCTCAGTCTTCAAACTGATGCTTGCAACTCATCCCATAAGTACGTAAACGAGATAGGAGAATGGGTTGTGTGTCGCTTATGGATGAAGAAAAGAAGTATAGAAAATGATGGCAGCGCCACAGAGAGTCATCAGAAGCATAGGCAAAAGAGAGTTAAAAGTGGAGCAAGATTGTTTGATTATATGATGGTAGGAAACACCCATTCTTCTACATCGTCCTCATGTTCAAGTTCAAGTTCCACTAACATCATCGAGGTCTCTTCACATGTATCGGACCATGAACAAACCAGTGCCTATGCACATTTT 738 0.4106 MEKLNFGKNGVSKLPPGFRFQPTDEELVFQYLKCKVFSFPLPASIIPEINVCKHDPWDLPEVCSGNCDDTQERYFFSRKEGKYRNGNRMNRTTKCGYWKATGSDKRITCSTCNNGIVGIRKTLTFYEGKSPRGSRTDWVLHEYRLLSLQTDACNSSHKYVNEIGEWVVCRLWMKKRSIENDGSATESHQKHRQKRVKSGARLFDYMMVGNTHSSTSSSCSSSSSTNIIEVSSHVSDHEQTSAYAHF 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2741g00003 246 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 221 - -
Mupr2741g00003 246 ProSiteProfiles NAC domain profile. 14 174 IPR003441 GO:0003677|GO:0006355
Mupr2741g00003 246 Gene3D NAC domain 23 179 IPR036093 GO:0003677|GO:0006355
Mupr2741g00003 246 Pfam No apical meristem (NAM) protein 15 145 IPR003441 GO:0003677|GO:0006355
Mupr2741g00003 246 SUPERFAMILY NAC domain 11 174 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2741g00003 Mupr-Chr2741 35550 37276 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2741g00003 1 177 NAC Transcription Factor Family AT5G13180 58.192 7.99e-67 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr2741g00003 NAM 3.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2741g00003 - - gmx:100803200 377.096