Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2740g00005 ATGGCAGGGATAGCATTCGGACGCTTCGATGATTCTTTCAGTTTGGGCTCCATCAAGGCCTATATTGCTGAGTTCATCTCCACCTTGCTCTTTGTTTTTGCTGGTGTTGGTTCAGCCATAGCCTATGCTAAGTTGACATCAGATGCAGCTCTTGATCCTGCTGGGTTGGTAGCTGTTGCTATTTCCCACGGTTTTGCTCTGTTTGTTGCTGTTTCTGTTGGAGCCAACATTTCTGGTGGCCATGTGAACCCTGCTGTGACCTTTGGGTTGGCTCTTGGGGGCCATATCACCATCCTGACTGGTCTCTTCTACTGGATTGCACAGCTTCTTGGCTCCATAGTGGCATGCTTACTCCTCAAGTTTGTCACTGGCTATAATACCCCTGTCCACAGCGTTGCTGCGGGAGTAGGAGCTGGTGAAGGAGTTGTTACAGAGATCATCATCACATTTGGATTAGTGTACACTGTGTATGCCACAGCAGCTGATCCGAAGAAGGGTTCATTGGGCATCATTGCACCCATTGCCATAGGTTTCATAGTTGGTGCCAACATCTTAGTTGCAGGACCATTCTCTGGTGGCTCAATGAACCCTGCACGCTCCTTTGGCCCTGCACTTGTCACTGGTGACTTTCATGACAACTGGATCTACTGGGTTGGCCCTCTCATTGGTGGTGGTTTGGCTGGTCTTATCTATACCTATGCCTTCATTACCACCCAGCATGCACCTTTGCCCAATGATTTTTGA 744 0.4892 MAGIAFGRFDDSFSLGSIKAYIAEFISTLLFVFAGVGSAIAYAKLTSDAALDPAGLVAVAISHGFALFVAVSVGANISGGHVNPAVTFGLALGGHITILTGLFYWIAQLLGSIVACLLLKFVTGYNTPVHSVAAGVGAGEGVVTEIIITFGLVYTVYATAADPKKGSLGIIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPALVTGDFHDNWIYWVGPLIGGGLAGLIYTYAFITTQHAPLPNDF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2740g00005 247 PANTHER AQUAPORIN-8 4 241 IPR034294 -
Mupr2740g00005 247 CDD MIP 19 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr2740g00005 247 FunFam Probable aquaporin TIP1-1 2 247 - -
Mupr2740g00005 247 SUPERFAMILY Aquaporin-like 13 242 IPR023271 -
Mupr2740g00005 247 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr2740g00005 247 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr2740g00005 247 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr2740g00005 247 PRINTS Major intrinsic protein family signature 177 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr2740g00005 247 PRINTS Major intrinsic protein family signature 144 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr2740g00005 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr2740g00005 247 Pfam Major intrinsic protein 15 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr2740g00005 247 NCBIfam MIP family channel protein 23 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr2740g00005 247 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Mupr2740g00005 247 Gene3D Glycerol uptake facilitator protein. 2 245 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2740g00005 Mupr-Chr2740 46216 47790 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2740g00005 1 247 Major Intrinsic Protein MIP AT3G16240 78.000 2.33e-133 374