Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2740g00001 ATGTGTCACGAAACTCGTAGCAGTAGCAGCAGCAGCAGCAACTCCTCCACGTCGAAACCCCCAAAACAGAGCAAGGCGAAGCGAGGCAGAGAAGCGGTTTATCACGGCGTGAGAATGAGAAACTGGGGCAAATGGGTGTCGGAAATTCGGGAGCCACGCAAGAAATCACGCATCTGGTTGGGCACTTTCGCCACACCTGAAATGGCAGCACGTGCGCACGACGTTGCGGCGTTGAGCATTAAGGGTCAAACGGCGATTCTCAACTTTCCAAACATAGCGAAAATGCTACCCAGACCCGTCACGCTGAACCCGCGTGACATCCAAGCCGCCGCCGCTGAAGCCGCCGCGATGGTGGAGTTCGACCGCGAGGGTTGGGAGGCGGAGGCGGAGGCGGAGTCGTCGGAGCTGAGCCAGATTGTGGAACTTCCAAACATAGAAGAGAGCTTGGAATCGGTGGAATCGAAAAGTGAGTTCGCGCTAATAGAGTCGGTGGATAGTTGGGTGTACCCTCCAAGAAGCATAAGTGAGATGAACATGATGATGATGTTTGGGGAACACAGTTTTATGACCGACACCTCTCACTCTGACTCTCTATTCCAATTTCCCTCTGATCACCACAAAACATGTTCCGTTTAG 636 0.5346 MCHETRSSSSSSSNSSTSKPPKQSKAKRGREAVYHGVRMRNWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALSIKGQTAILNFPNIAKMLPRPVTLNPRDIQAAAAEAAAMVEFDREGWEAEAEAESSELSQIVELPNIEESLESVESKSEFALIESVDSWVYPPRSISEMNMMMMFGEHSFMTDTSHSDSLFQFPSDHHKTCSV 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2740g00001 211 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Mupr2740g00001 211 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
Mupr2740g00001 211 MobiDBLite consensus disorder prediction 1 22 - -
Mupr2740g00001 211 MobiDBLite consensus disorder prediction 1 32 - -
Mupr2740g00001 211 SUPERFAMILY DNA-binding domain 33 90 IPR016177 GO:0003677
Mupr2740g00001 211 FunFam Ethylene-responsive transcription factor 2 32 91 - -
Mupr2740g00001 211 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 152 - -
Mupr2740g00001 211 Pfam AP2 domain 33 82 IPR001471 GO:0003700|GO:0006355
Mupr2740g00001 211 CDD AP2 34 91 IPR001471 GO:0003700|GO:0006355
Mupr2740g00001 211 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
Mupr2740g00001 211 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Mupr2740g00001 211 Gene3D AP2/ERF domain 33 92 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2740g00001 Mupr-Chr2740 20811 21446 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2740g00001 8 171 AP2-EREBP Transcription Factor Family AT5G11590 52.356 4.17e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr2740g00001 AP2 4.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2740g00001 K09286 - gmx:100787471 276.944