Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2729g00001 ATGAAAAGAAAGGCCAATTGCGACAACCAAGATGCTGTGAACAGAGGTGCTTGGTCTGCCGAGGAAGACAAAATCCTTATGAAGTACGTTGAAGTTCATGGAGAAGGAAAATGGAGGGAGGTTTCCAGAAGTGCTGGTTTGAAACGAAGTGGAAAGAGTAGTAGATTCAGATGGTTGAATTATCTCAAGCCAGATATCAAGAGAGGAAACATTTCCTCGGATGAAGAAGATCTCATTATTCGACTACATAATCTTCTAGGCAATAGATGGTCTCTCATTGCGGGACGAATACCGGGACGAACAGACAACGAGATTAAAAACTATTGGAATAGTCATTTGAGAAAAAAGATTGAGAAGCACAACCAATCAAGAGTTGAATCTAAAGAGTGCACAAAAAACTTTTTGGATATCATTAATACTACGACCCATGCAGAGAGTGATTCAGTGAACACAATGAATAATGTGGTTAATACAACATGCTGGGATAGCCACAACCCTTTTGCATCCACCTCACAAGATGACCATGACAATTATGAGAAGCTAATAGTGCCAAATGAGGGTTGTCATTGTGGTAATGGATGTGCTAGTGTTGAAATACCGAAGGACTTTGGAGATGAAGCGTGCTGGCTTGAGGATTCATTAATAGACCAACCATGGCATGAAAGTTGGAAACTTATCGACTTCTTTCCACCCGATCAAGTGGCGAATTTTTTTTCTTTGTGA 723 0.4039 MKRKANCDNQDAVNRGAWSAEEDKILMKYVEVHGEGKWREVSRSAGLKRSGKSSRFRWLNYLKPDIKRGNISSDEEDLIIRLHNLLGNRWSLIAGRIPGRTDNEIKNYWNSHLRKKIEKHNQSRVESKECTKNFLDIINTTTHAESDSVNTMNNVVNTTCWDSHNPFASTSQDDHDNYEKLIVPNEGCHCGNGCASVEIPKDFGDEACWLEDSLIDQPWHESWKLIDFFPPDQVANFFSL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2729g00001 240 Gene3D - 7 68 - -
Mupr2729g00001 240 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mupr2729g00001 240 FunFam Myb transcription factor 15 67 - -
Mupr2729g00001 240 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Mupr2729g00001 240 Gene3D - 72 135 - -
Mupr2729g00001 240 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Mupr2729g00001 240 CDD SANT 72 113 IPR001005 -
Mupr2729g00001 240 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mupr2729g00001 240 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 164 - -
Mupr2729g00001 240 SUPERFAMILY Homeodomain-like 14 109 IPR009057 -
Mupr2729g00001 240 SMART sant 14 64 IPR001005 -
Mupr2729g00001 240 SMART sant 67 115 IPR001005 -
Mupr2729g00001 240 FunFam Transcription factor TT2 71 140 - -
Mupr2729g00001 240 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Mupr2729g00001 240 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Mupr2729g00001 240 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2729g00001 Mupr-Chr2729 8177 9161 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2729g00001 2 121 MYB Transcription Factor Family AT3G13540 61.667 1.99e-52 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr2729g00001 Myb_DNA-binding 1.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2729g00001 K09422 - gmx:100780809 273.092