Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2723g00006 ATGGATTCGAATTCCCGTTACCAAGTCCAGCAGCAGCAGCAACCCAATTCAGGGTTACTTCGCTTTCGCTCTGCCCCTACTCCACTTCTTGCTAATTTCAAACAAGGCGAAGCACCCAATAACGGGAACGTGTGGGAGGGTTCTGAACCCGTTTTGAGATTCTTGAATTCTGGGGACGCTCACGATACGACGTCGCCTAGCTTACGAGAATTCGTGGATAATAATAAGGCTTCTAACAATAATAAAGCAGCGAAGGAATCATCAATACCATCATCACCTCTGAGTCGCATGAATTCCCAGCAGGGTTATAGTACTTGTGTGTTACCCTCTCGCTATCCAAGGCATGATTCTAGTGTAACTTCACCTATGATGATGCCTTCTATGGGAATGGATCAGAGTGCCACCAAAAGCTTTAATTCCCATCTTCTTAGGCAGAGTACCTCCCCTGCCGCTCATTTCCCTAACAACATCTCTTTTCAGAACGGGTATGATACTGTGAAAGGTGTTGGAAACTATGGTGAGGTTAATGGGCATGATGGTGAAGTTAGTCTATCTATGAACGGAATGAAGAATCAAATTAGTTTCTCGTCGAGGAGTCCTTCTTCCTTGGGAATGTTATCACCAACCTCCAAAATGGTAACTAGCCCTGAGGATGGGAGACAGGTAGGTAGCAATGGTGATGCTGGATATTATGGCCCTAGATTCCCTTATACTTCTTGGAATGAGACGTCACACCTGAAAAGACAGCGAAGTAGCAATGATGAGATACCTTCTGATGCTCAGTACTTAATACAACTACGCTGTCATACTCAGAATGGAGAGCTAGGAAATCAAGTTCATACACTTCCGCATTGTTTGAGTTTGCCAAGAGCGTCGTCGGAGATTTTTGCTATGGATAATTTGCTTCAGTTCACGGATTCTGTTCCTTGTAAAATCAGAGCAAAGAGAGGCTTTGCTACTCATCCTCGAAGCATTGCCGAAAGGGTGAGAAGAACTAGGATCAGTGAACGAATAAGAAAATTGCAAGAGCTTGTTCCAAACATGGAGAAGCAAACCAGCACAGCAGAGATGTTGGACTTGGCAGTAGAGTACATAAAAGATCTTCAGAAACAATTCAAGACTCTGAGTGAAAGACGAGCTAAATGCAAATGTATAAACATGCACAAGTCAGGAACAGATCAAATTGCTTGA 1191 0.4366 MDSNSRYQVQQQQQPNSGLLRFRSAPTPLLANFKQGEAPNNGNVWEGSEPVLRFLNSGDAHDTTSPSLREFVDNNKASNNNKAAKESSIPSSPLSRMNSQQGYSTCVLPSRYPRHDSSVTSPMMMPSMGMDQSATKSFNSHLLRQSTSPAAHFPNNISFQNGYDTVKGVGNYGEVNGHDGEVSLSMNGMKNQISFSSRSPSSLGMLSPTSKMVTSPEDGRQVGSNGDAGYYGPRFPYTSWNETSHLKRQRSSNDEIPSDAQYLIQLRCHTQNGELGNQVHTLPHCLSLPRASSEIFAMDNLLQFTDSVPCKIRAKRGFATHPRSIAERVRRTRISERIRKLQELVPNMEKQTSTAEMLDLAVEYIKDLQKQFKTLSERRAKCKCINMHKSGTDQIA 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2723g00006 396 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 100 388 - -
Mupr2723g00006 396 Pfam Helix-loop-helix DNA-binding domain 324 369 IPR011598 GO:0046983
Mupr2723g00006 396 MobiDBLite consensus disorder prediction 195 224 - -
Mupr2723g00006 396 CDD bHLH_AtbHLH_like 323 376 IPR045239 -
Mupr2723g00006 396 SMART finulus 324 374 IPR011598 GO:0046983
Mupr2723g00006 396 MobiDBLite consensus disorder prediction 58 107 - -
Mupr2723g00006 396 MobiDBLite consensus disorder prediction 56 121 - -
Mupr2723g00006 396 FunFam Transcription factor bHLH130 family 319 388 - -
Mupr2723g00006 396 Gene3D - 320 389 IPR036638 GO:0046983
Mupr2723g00006 396 Coils Coil 331 351 - -
Mupr2723g00006 396 MobiDBLite consensus disorder prediction 1 21 - -
Mupr2723g00006 396 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 321 385 IPR036638 GO:0046983
Mupr2723g00006 396 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 318 368 IPR011598 GO:0046983
Mupr2723g00006 396 MobiDBLite consensus disorder prediction 1 23 - -
Mupr2723g00006 396 MobiDBLite consensus disorder prediction 195 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2723g00006 Mupr-Chr2723 84483 86710 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2723g00006 1 374 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 43.377 2.78e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr2723g00006 HLH 1.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2723g00006 - - gmx:100796534 520.39