Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2723g00003 ATGGCGTATGCTGCGATGAAGCCCACTAAGCCCGGTTTGGAGGAGTCCCAGGAGCAGATCCACAAGATTAGGATCACCCTTTCCTCCAAGCACGTCAAAAATCTCGAGAAGGTTTGTGCGGACTTAGTGCGCGGTGCAAAGGACAAGCGCCTCAGGGTTAAGGGACCTGTGAGGATGCCCACTAAGCCCACGAAGCCCGGCTTGGAAGAATCTCAGGAACAGATCCACAAGATTAGGATTACCCTTTCCTCCAAGCACGTCAAAAATCTCGAGAAAGTTTGTGCCGACTTGGTTCGCGGTGCAAAGGACAAGCGCCTCAGGGTTAAGGGACCTGTTAGGATGCCCACTAAGGTTCTTCACATCACTACCAGAAAGTCCCCTTGTGGTGAAGGTACCAACACATGGGACAGATTTGAACTCCGAGTGCACAAGAGAGTCATTGACCTCTACAGTTCCCCAGACGTGGTTAAGCAGATTACCTCTATCACCATTGAACCTGGTGTGGAGGTTGAGGTCACCATTGCAGATGCTTGA 534 0.5131 MAYAAMKPTKPGLEESQEQIHKIRITLSSKHVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKPTKPGLEESQEQIHKIRITLSSKHVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2723g00003 177 ProSitePatterns Ribosomal protein S10 signature. 101 116 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Mupr2723g00003 177 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 14 62 IPR001848 GO:0003735|GO:0005840|GO:0006412
Mupr2723g00003 177 SUPERFAMILY Ribosomal protein S10 77 174 IPR036838 -
Mupr2723g00003 177 Gene3D Ribosomal protein S10 domain 3 65 IPR036838 -
Mupr2723g00003 177 Pfam Ribosomal protein S10p/S20e 24 65 IPR027486 -
Mupr2723g00003 177 Pfam Ribosomal protein S10p/S20e 79 173 IPR027486 -
Mupr2723g00003 177 Hamap 30S ribosomal protein S10 [rpsJ]. 75 174 IPR001848 GO:0003735|GO:0005840|GO:0006412
Mupr2723g00003 177 PRINTS Ribosomal protein S10 family signature 134 148 IPR001848 GO:0003735|GO:0005840|GO:0006412
Mupr2723g00003 177 PRINTS Ribosomal protein S10 family signature 112 127 IPR001848 GO:0003735|GO:0005840|GO:0006412
Mupr2723g00003 177 PRINTS Ribosomal protein S10 family signature 77 90 IPR001848 GO:0003735|GO:0005840|GO:0006412
Mupr2723g00003 177 NCBIfam 30S ribosomal protein S10 76 174 IPR005729 GO:0003735|GO:0006412|GO:0015935
Mupr2723g00003 177 Gene3D Ribosomal protein S10 domain 66 176 IPR036838 -
Mupr2723g00003 177 FunFam 40S ribosomal protein S20 62 176 - -
Mupr2723g00003 177 ProSitePatterns Ribosomal protein S10 signature. 46 61 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Mupr2723g00003 177 SUPERFAMILY Ribosomal protein S10 22 64 IPR036838 -
Mupr2723g00003 177 SMART Ribosomal_S10_2 79 173 IPR027486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2723g00003 Mupr-Chr2723 34284 46765 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2723g00003 1 62 Cytoplasmic Ribosomal Protein Gene Family AT3G47370 87.097 1.46e-31 108