Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2715g00005 ATGGGTCTGAGAGACATTGGCGCTTCACTGCCTCCTGGGTTTCGGTTTTATCCGAGTGACGAGGAATTGGTCTGTCATTACCTCTACAAAAAGATCGCAAATGAGCAAGTTCTCAAGGGTACCTTGGTAGAAATTGACCTGCACATATGCGAACCGTGGCAACTTCCTGAGGTAGCTAAGCTGAATGCAACTGAATGGTACTTCTTCAGCTTCCGGGACCGCAAATACGCGACCGGATACCGGACCAACCGGGCAACGACATCTGGGTATTGGAAAGCGACGGGGAAGGATCGTACGGTGATGGATCCAATCACGCAAGAGGTTGTAGGGATGAGGAAAACATTGGTGTTCTACAGGAACAGAGCTCCAAATGGCATCAAAACTGGATGGATCATGCACGAGTTCCGCTTGGAGACCCCACACATGCCTCCAAAGGAGGACTGGGTATTGTGCAGAGTCTTCCACAAAAGCAAAGAAGATAACAGTTCCCAAGTCGTGTATGAGACAACATGTACACCTTCATCCCTAACTTTGGCTTCGTCATCTCCACCCAACCAACCCATGCTTGGTGGCTACAACAGACTTCCCTCCATGCCAACTTTCAACCCAAACCAAAACACTTCTTTCATGGGTCTCCTTCACTTTGCTCGTGAAACAAACACCAACAATAATAGCACTGTTACTCAAATCAGTTCCAAAGCTGATGATGGATATGGCTTCTTATGGGACATGGACCTAGAAGAAAATACCCTAGAAGATGCCGTCGCTTCAAACTTGGACACAATAAGATTCGACCTTGATAATAATAATAATAATAATAATATG 825 0.4618 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKIANEQVLKGTLVEIDLHICEPWQLPEVAKLNATEWYFFSFRDRKYATGYRTNRATTSGYWKATGKDRTVMDPITQEVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSKEDNSSQVVYETTCTPSSLTLASSSPPNQPMLGGYNRLPSMPTFNPNQNTSFMGLLHFARETNTNNNSTVTQISSKADDGYGFLWDMDLEENTLEDAVASNLDTIRFDLDNNNNNNNM 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2715g00005 275 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Mupr2715g00005 275 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 219 - -
Mupr2715g00005 275 Gene3D NAC domain 19 161 IPR036093 GO:0003677|GO:0006355
Mupr2715g00005 275 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Mupr2715g00005 275 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2715g00005 Mupr-Chr2715 54973 61454 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2715g00005 6 159 NAC Transcription Factor Family AT1G56010 58.025 7.21e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr2715g00005 NAM 4.9e-37 No_clan