Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2714g00002 ATGGCCGACTCTGATCGCTCCTCCAGTGAAATTTCTTCGGATTCTTCTCGGAAGCGAGGCTCTTCCAAAGTTGAATTTTCTGAAGATGAGGAAACTCTTATCATCAGGATGTATAAACTGGTTGGGGAGAGGTGGTCTTTGATTGCCGGAAGAATTCCTGGAAGAACAGCAGAGGAAATAGAGAAATATTGGACTTCGAGATTCTCGAGTTCTAAAAAATAG 222 0.4279 MADSDRSSSEISSDSSRKRGSSKVEFSEDEETLIIRMYKLVGERWSLIAGRIPGRTAEEIEKYWTSRFSSSKK 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2714g00002 73 SUPERFAMILY Homeodomain-like 23 68 IPR009057 -
Mupr2714g00002 73 SMART sant 22 70 IPR001005 -
Mupr2714g00002 73 Pfam Myb-like DNA-binding domain 23 65 IPR001005 -
Mupr2714g00002 73 ProSiteProfiles Myb-like domain profile. 18 68 IPR001005 -
Mupr2714g00002 73 MobiDBLite consensus disorder prediction 1 27 - -
Mupr2714g00002 73 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 72 IPR017930 -
Mupr2714g00002 73 Gene3D - 25 68 - -
Mupr2714g00002 73 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 18 69 - -
Mupr2714g00002 73 CDD SANT 25 64 IPR001005 -
Mupr2714g00002 73 FunFam MYB-like transcription factor 25 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2714g00002 Mupr-Chr2714 17289 19114 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2714g00002 18 69 MYB Transcription Factor Family AT5G14750 53.846 2.41e-16 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr2714g00002 Myb_DNA-binding 7.7e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2714g00002 - - ccaj:109789544 115.931