Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mupr2714g00001 | ATGAACGACCTTCTCACTGATTCGTTTGTTGGTGAGGCTACTAATGCCCAGCCTTCTAGAGAAAGTGATATTGAAATGGGACAGGTTCCCAGAAGCAACTCCGATATGGGAATGGAAGCTTTTAATAAACAGATCCATGAGGCTGATAAACAAATTGATAAGTTGTCTGCACTACTTCAAAAGCTAAAGGAAGCTAACGAGGAATCGAAAGCTGTAACAAAAGCATCTGCCATGAAAGCTATCAAGAAGAGGATGGAGAAAGATATTGATGAAGTTGGAAAGATTGCATATGGTGTCAAAACAAAAATCGAGGCTATAAGCAGAGATAACCTATCCAATAGACAAAAGCCTGGCTGTGAGAAGGGAACAGGTATTGACAGAGCAAGAATGAATATGACAAATGCCTTGACTAAAAAATTCAAGGATCTCATGACAGAGTTCCAGAGTCTAAGACAAAGAATACAAGATGAATATCGTGAGGTTGTGGAAAGAAGAGTTATTACAGTCACGGGAACTAGGCCAGATGATGAGACAATTGATCACCTGATCGAAACTGGAAACAGTGAGCAAATCTTCCAGAGAGCAATTCTAGAAGCAGGCCGAGGACAGGTTGTAAACACGGTAGAAGAAATTCAGGAGAGACATGATGCTGTAAAAGAAATTGAGAAAAAACTTCTTGATTTACATCAGATTTACCTTGACATGGCAGTGTTAGTTGAAGCTCAGGGAGAAATTCTAGATAACATTGAAAGTCAGGTCAACAATGCAGTCGATCATGTCCAGAGAGGGACAACTGCACTTCAAAATGCTAAGAAACTCCAGAAGAACTCTCGAAAATGGATGTGCATTGCCATCATTATACTGTTGATAATAGTTACAAACGCAACTGATCATGTGAGACTGGGTAATGACGCTCTCCAAACTGCAAAAAGTTTGCAAAAGAAGTCAAGGAAATGCATGATGATTTCCATTATATTGCTCCTGGTCATTGCCATCATTATCGTACTCTCTATTTTGAAACCATGGAAGAAGTGA | 1035 | 0.3961 | MNDLLTDSFVGEATNAQPSRESDIEMGQVPRSNSDMGMEAFNKQIHEADKQIDKLSALLQKLKEANEESKAVTKASAMKAIKKRMEKDIDEVGKIAYGVKTKIEAISRDNLSNRQKPGCEKGTGIDRARMNMTNALTKKFKDLMTEFQSLRQRIQDEYREVVERRVITVTGTRPDDETIDHLIETGNSEQIFQRAILEAGRGQVVNTVEEIQERHDAVKEIEKKLLDLHQIYLDMAVLVEAQGEILDNIESQVNNAVDHVQRGTTALQNAKKLQKNSRKWMCIAIIILLIIVTNATDHVRLGNDALQTAKSLQKKSRKCMMISIILLLVIAIIIVLSILKPWKK | 344 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mupr2714g00001 | 344 | PANTHER | SYNTAXIN | 37 | 288 | IPR045242 | - | |
| Mupr2714g00001 | 344 | Pfam | Syntaxin | 41 | 243 | IPR006011 | GO:0016020 | |
| Mupr2714g00001 | 344 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
| Mupr2714g00001 | 344 | FunFam | Syntaxin 132 | 33 | 162 | - | - | |
| Mupr2714g00001 | 344 | Coils | Coil | 140 | 160 | - | - | |
| Mupr2714g00001 | 344 | SMART | SynN_4 | 33 | 159 | IPR006011 | GO:0016020 | |
| Mupr2714g00001 | 344 | SUPERFAMILY | t-snare proteins | 35 | 263 | IPR010989 | GO:0016020|GO:0016192 | |
| Mupr2714g00001 | 344 | Pfam | SNARE domain | 244 | 292 | IPR000727 | - | |
| Mupr2714g00001 | 344 | Pfam | SNARE domain | 292 | 335 | IPR000727 | - | |
| Mupr2714g00001 | 344 | SMART | tSNARE_6 | 203 | 270 | IPR000727 | - | |
| Mupr2714g00001 | 344 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 208 | 270 | IPR000727 | - | |
| Mupr2714g00001 | 344 | CDD | SynN | 38 | 195 | IPR006011 | GO:0016020 | |
| Mupr2714g00001 | 344 | Coils | Coil | 38 | 75 | - | - | |
| Mupr2714g00001 | 344 | Gene3D | - | 293 | 340 | - | - | |
| Mupr2714g00001 | 344 | Gene3D | - | 201 | 292 | - | - | |
| Mupr2714g00001 | 344 | FunFam | Syntaxin 132 | 201 | 293 | - | - | |
| Mupr2714g00001 | 344 | CDD | SNARE_syntaxin1-like | 207 | 268 | - | - | |
| Mupr2714g00001 | 344 | Gene3D | - | 33 | 162 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mupr2714g00001 | Mupr-Chr2714 | 1530 | 8104 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mupr2714g00001 | 1 | 282 | SNARE and Associated Proteins | AT3G03800 | 61.702 | 4.00e-121 | 349 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mupr2714g00001 | K08486 | - | gmx:100800991 | 539.265 |