Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2713g00005 CAGTGGCAGCACACACATCTTGGTGTCTCTAGGATGGAACCTAATGACAACCAACTCAGCTCCTTCTTCCACCACCACAACCACAACCACAACCACCACCAGCACCACCACCACCAGCAGCCTCCGCCTCCGCCTCCACCGAGCACGGCGTCGCCGACGAACGGGCTCCTGCCGAACGCGGATGGGTCCCACATGCTGTACCCTCACTCGGTGGCGTCCGCTGTCTCGTCCCAGCTGGAGCCGGCCAAGCGGAAGCGAGGGCGGCCGAGGAAGTACGGCACGCCGGAGCAGGCTCTGGCGGCGAAGAAAGCCGCCACGACGTCGTCTCAGTCGTTCTCCGCGGACAAGAAGCCCCACTCCCCGACGTTTCCTTCCTCTTCTTTCAGTTCTAAGAAATCTCATTCCTTCGCTCTAGGCAATGCAGGGCAAGGGTTCACTCCACATGTCATTTCTGTTGCTGCTGGTGAGGATGTTGGCCAGAAAATTATGTTATTTATGCAACAAAGTAGGCGTGAGATGTGTATCCTGTCTGCATCTGGTTCCATCTCCAATGCCTCTCTTCGCCAGCCAGCAACCTCAGGAGGCAACATTACGTATGAGGGTCGATTTGAGATAATTTCACTTACTGGTTCTTATGTCCGTAATGAACTTGGAACTCGTACTGGTGGTCTTAGTGTGTGCCTATCTAATACTGATGGACAAATCATAGGTGGTGGAGTTGGTGGGCCGCTTAAAGCAGCTGGTCCAGTTCAGGTCATAGTTGGAACATTTTTTATTGACAACAAGAAGGATACTGGTGCTGGTGTAAAAGTTGATGCCTCTGCCAGCAAGTTGCCATCTCCAGTCAGCGAACCAGTGTCAAGTTTAGGTTTCCGCCAAACAGTTGACTCTTCCAGTGGAAATCCAATCCGCGGAAATGATGAGCATCAAGCTATGGGGGGAAGTCATTTCATGATTCAACAGCTTGGGTTGCATGGGACGCCTCCCCGGTCCACAGACTGGGGTCGTCCGGATTCAAGAAGTATCGGTTTTGAGCTGACAGGAAGAACAGGTCATGGGGCGCACCAGTCTCCTGAGAATGGGGGCTATGAACAAATTCCAGATTGA 1107 0.5312 QWQHTHLGVSRMEPNDNQLSSFFHHHNHNHNHHQHHHHQQPPPPPPPSTASPTNGLLPNADGSHMLYPHSVASAVSSQLEPAKRKRGRPRKYGTPEQALAAKKAATTSSQSFSADKKPHSPTFPSSSFSSKKSHSFALGNAGQGFTPHVISVAAGEDVGQKIMLFMQQSRREMCILSASGSISNASLRQPATSGGNITYEGRFEIISLTGSYVRNELGTRTGGLSVCLSNTDGQIIGGGVGGPLKAAGPVQVIVGTFFIDNKKDTGAGVKVDASASKLPSPVSEPVSSLGFRQTVDSSSGNPIRGNDEHQAMGGSHFMIQQLGLHGTPPRSTDWGRPDSRSIGFELTGRTGHGAHQSPENGGYEQIPD 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2713g00005 368 Pfam Plants and Prokaryotes Conserved (PCC) domain 147 257 IPR005175 -
Mupr2713g00005 368 MobiDBLite consensus disorder prediction 280 305 - -
Mupr2713g00005 368 MobiDBLite consensus disorder prediction 25 39 - -
Mupr2713g00005 368 Gene3D - 147 273 - -
Mupr2713g00005 368 MobiDBLite consensus disorder prediction 101 134 - -
Mupr2713g00005 368 MobiDBLite consensus disorder prediction 323 368 - -
Mupr2713g00005 368 MobiDBLite consensus disorder prediction 1 24 - -
Mupr2713g00005 368 MobiDBLite consensus disorder prediction 275 310 - -
Mupr2713g00005 368 ProSiteProfiles PPC domain profile profile. 141 279 IPR005175 -
Mupr2713g00005 368 MobiDBLite consensus disorder prediction 1 134 - -
Mupr2713g00005 368 CDD DUF296 146 257 IPR005175 -
Mupr2713g00005 368 SUPERFAMILY AF0104/ALDC/Ptd012-like 143 257 - -
Mupr2713g00005 368 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 30 288 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2713g00005 Mupr-Chr2713 21048 26026 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2713g00005 61 368 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 53.134 3.67e-89 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2713g00005 - - gmx:100816781 566.614