Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2710g00003 TCTGCTTCTGTTTCGCCGGTTAAAGCCCGTCGATCAAGATCATTATCAAGGTCCAGGAAAAGTCGTTCCAGGAGTCATGATTCCGCTGATGCCGAGAATCCTGGAAATAATTTGTATGTTACAGGCTTGTCCACAAGGATAACTGACAGTGATCTTCACAAGTATTTCAGTAAAGAAGGAAAGGTTATCGACTGCCACTTGGTAAAAGATCCTCGTACAAAAGTATCTCGTGGATTTGGTTTTGTCACTATGGAGACTAATGATGATGCTGAGTGCTGTATCAAGTATTTGAACCGCTCTGTTTTTGAAGGTCGGCTGATAACTGTGGAAAAGAAGGGTGTTGCCCTTTGTTCCCTCTCTTTGCAAAGAGAAATCGTGGCAGGACTCCAACTCCTGGCAGATACCGTGGTTCAAGAGATAAGCGGGGACAGGGATCAAGACGATCTCGTAGTTACTCGCCTAAGCGATGGAAGGATAGAGATTATAATTCAAGGGAACGGCGAGGAAGATCTCGCTCTCCACACAGTAGGAGGGTGGAAGATTACTCTGACACATACAGGAGGCGGAGGGATTAGTCCCTGTCAGCTGGGGATAGTCGATTCTAGTCGAAATTTGGTGTTGAAAGATGATTTT 633 0.4534 SASVSPVKARRSRSLSRSRKSRSRSHDSADAENPGNNLYVTGLSTRITDSDLHKYFSKEGKVIDCHLVKDPRTKVSRGFGFVTMETNDDAECCIKYLNRSVFEGRLITVEKKGVALCSLSLQREIVAGLQLLADTVVQEISGDRDQDDLVVTRLSDGRIEIIIQGNGEEDLALHTVGGWKITLTHTGGGGISPCQLGIVDSSRNLVLKDDF 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2710g00003 211 MobiDBLite consensus disorder prediction 1 36 - -
Mupr2710g00003 211 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 114 IPR000504 GO:0003723
Mupr2710g00003 211 Gene3D - 2 114 IPR012677 -
Mupr2710g00003 211 SMART rrm1_1 37 110 IPR000504 GO:0003723
Mupr2710g00003 211 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 107 IPR000504 GO:0003723
Mupr2710g00003 211 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 25 112 - -
Mupr2710g00003 211 SUPERFAMILY RNA-binding domain, RBD 28 111 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2710g00003 Mupr-Chr2710 40850 43688 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2710g00003 37 109 Eukaryotic Initiation Factors Gene Family AT2G23350 35.616 6.61e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2710g00003 K12897 - gmx:100798472 182.185